| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5422 |
|---|
| Symbol | |
|---|
| ID | 4094610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 2725997 |
|---|
| End bp | 2726884 |
|---|
| Gene Length | 888 bp |
|---|
| Protein Length | 295 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638018702 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_625268 |
|---|
| Protein GI | 107027757 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.906945 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGGCCG ATCTCAACTT ACTCAAGGCG TTCAGCGTTC TGGTAGCAGA GCGCAGCGTT
GTCAAGGCGG CAAAACGTCT GCATCTGAGC GAATCCGCCA TGAGCCGCAC CCTGAGCCGA
GTGCGCGACG CGTTCGGGGA CCCTATCCTC ATCCGGGCCG GCCGTTCGCT GATTCCGACA
CCTCGTGCCT TGTCATTGCA TCCCCGCGTA CTCGACATGC TGGCAATGGC GCAGGACATC
CTCACGCGGG CCGAGCTCGT TGACCCTGCA TCGCTGACGC AAACCTTCAC CATCCGCTGT
AACGAGGGAT TTGCGACGGA ATTCGGTGCG AAGCTACTCG ACATCGTCAC TACGGCAGCG
CCGGGCGTTC ACCTGCGCTT TTCCATGCAG GACGAGAAGG ACGCCACCGC GCTGCGAGAG
GACAAGGCGG ATATCGAAGT TGGGGTGCTT GGGAAAAGTG GACCGGAGAT TCGTGTGCAG
ACGCTACTGA GAGACCGTTT TGTCGGTGTG GTTGCGATGT CTCACCCGCT TGCTGGCCAT
GATCCGGTCA GTATCGATGC ATACACGCGA TACCCGCACG TGAGCGTTTC GCGCAGGGGG
CGTCGCGACG GCCCGATCGA TGCTTTGCTG AGCGCGCTTG GCGCAAAGCG CCGTGTTGCA
ACGACGGTAT CGAGTTTTCC GGTTGCGCTC GCGCTGGCGC AAGGCGGCAG TATTGTTGCA
AACGTGCCAT TTCGTCAGAC TGCGTCAGGT CGCATTGGCA TGCATACGTT CGAGCTGCCC
GTCCAAACCG AGCCTGTCGT GGTCTCAATG ATGTGGCATC CGAAGGTCGA TCCGGACCCC
GCACACCGAT GGCTGCGGGA TTGCCTGCTG CAAACCTGTG CTGATTAG
|
|---|
| Protein sequence | MSADLNLLKA FSVLVAERSV VKAAKRLHLS ESAMSRTLSR VRDAFGDPIL IRAGRSLIPT
PRALSLHPRV LDMLAMAQDI LTRAELVDPA SLTQTFTIRC NEGFATEFGA KLLDIVTTAA
PGVHLRFSMQ DEKDATALRE DKADIEVGVL GKSGPEIRVQ TLLRDRFVGV VAMSHPLAGH
DPVSIDAYTR YPHVSVSRRG RRDGPIDALL SALGAKRRVA TTVSSFPVAL ALAQGGSIVA
NVPFRQTASG RIGMHTFELP VQTEPVVVSM MWHPKVDPDP AHRWLRDCLL QTCAD
|
|---|
| |