Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5392 |
Symbol | |
ID | 4094814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 2698576 |
End bp | 2699814 |
Gene Length | 1239 bp |
Protein Length | 412 aa |
Translation table | 11 |
GC content | 75% |
IMG OID | 638018672 |
Product | major facilitator transporter |
Protein accession | YP_625238 |
Protein GI | 107027727 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0287626 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCACCC CGACCCGTCT CGATGCCGCG CCGCGCGCGG CGCACGCCCC GGCCCGTCCG GCCGCGGCCG CCCATTCGAT GCCCGATCGC CGGCTCGTGC TGCTGCTCGC GGCCGCCGCC GGCCTCGGCG TCGCCCCGCT CTACTACGCG CAGCCGATGC TCGGCGCGCT CGCGCCCGAT CTCGGCGCGT CGGCGCGGGC GATCGGCTTC GTGCCGACGC TCACGCAGCT CGGCTATGCG CTCGGCATCC TGCTGCTCGC GCCGCTCGGC GACCGCTTCG ACCGGCGCCG CGTGATCGTG ACCAAGGCCG CCGCGCTGGT CGTCGCGCTG CTGTTGGCGT CGATCGCGCC GTCGCTCGGG CTGCTGCTCG CGGCGAGCTT CGCGATCGGC CTCGCCGCGA CGATGGCGCA GGACGTCGTG CCGGCCGCCG CGACGCTCGC GCACGACGCG CATCGCGGCC GGATCGTCGG CACGGTGATG ACGGGGTTGC TGCTCGGCAT CCTGCTGTCG CGCGTCGTGG CAGGATTCGT CGCCGAGACG GCCGGCTGGC GCGCGATGTT CGCGCTCGCG GCCGCCAGCG TCGCCGTGAT CGGCGCCGTG GCCGCACGCG GATTGCCGCG CTTCGAGCCG ACCACGCGGC TGCCGTATCG CGCGCTGATC GGCTCGCTCG GCGCGCTGTG GCGCGCGCAT TCGGCACTGC GCCGCGCCGC GCTCGCGCAG GGGCTGCTGG CCGTCGGGTT CAGCGCGTTC TGGTCGACGC TCGCGGTGAT GCTGCACGGC GCGCCGTTCC ACCTCGGCAG CGCGGCCGCC GGCGCCTTCG GCCTCGCGGG CGCCGCCGGC GCGCTGGCCG CGCCGGTCGC CGGGCGCCTG GCCGACCATC ACGGCCCGGA GCGCGTCACG CGCATCGGGA TCGGCATCGC GACGCTGTCG TTCGCATCGA TGGCCGCTGC GCCGCTGATG TCGCCGCATG CGCAGCTCGT GCTGCTCGCG GTCGCGACGA TCGGCTTCGA TCTCGGCGTG CAGGCGACGC TGATCGCGCA CCAGTCGATC GTCTACCGGA TCGATCCCGC GTCGCGCAGC CGCCTCAACG CGGTGCTGTT CGTCGGCATG TTCATCGGGA TGGCGGCCGG CGCCGCGATC GGCAGTTTGT TGCTCGCGCA ACTGGGCTGG AATGCGGTGA CCGCGCTGGC CGTCGCGACG TCGCTGGCCG CGCTCGCCGT GCGGGTGTGG CGCAACTGA
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Protein sequence | MSTPTRLDAA PRAAHAPARP AAAAHSMPDR RLVLLLAAAA GLGVAPLYYA QPMLGALAPD LGASARAIGF VPTLTQLGYA LGILLLAPLG DRFDRRRVIV TKAAALVVAL LLASIAPSLG LLLAASFAIG LAATMAQDVV PAAATLAHDA HRGRIVGTVM TGLLLGILLS RVVAGFVAET AGWRAMFALA AASVAVIGAV AARGLPRFEP TTRLPYRALI GSLGALWRAH SALRRAALAQ GLLAVGFSAF WSTLAVMLHG APFHLGSAAA GAFGLAGAAG ALAAPVAGRL ADHHGPERVT RIGIGIATLS FASMAAAPLM SPHAQLVLLA VATIGFDLGV QATLIAHQSI VYRIDPASRS RLNAVLFVGM FIGMAAGAAI GSLLLAQLGW NAVTALAVAT SLAALAVRVW RN
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