Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_5316 |
Symbol | |
ID | 4094393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 2612835 |
End bp | 2614355 |
Gene Length | 1521 bp |
Protein Length | 506 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638018597 |
Product | amino acid/peptide transporter |
Protein accession | YP_625163 |
Protein GI | 107027652 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG3104] Dipeptide/tripeptide permease |
TIGRFAM ID | [TIGR00924] amino acid/peptide transporter (Peptide:H+ symporter), bacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.179594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGCACG CACCTGTTTC ACAGACCCGA TCGTTTACGA CGGTCTTCCT CATCGAAATG TGGGAGCGCT TCGGCTACTA CGGCATGGCC GCGCTCCTGG TCCTCTTCAT GGTCGACCGG CTCGGCTTCA CCGACAGCCA CGCGAACCTG ACCTGGGGTG CATTCACCGC ACTCGTCTAC GCCGCGCCGT CGATCGGCGG CTGGATCGGC GACAAGGTGC TCGGCGCCCG CCGCACGATG ATCATCGGCG CGTCCGTGCT GTGCGCCGGC TACCTGATGC TCGCGGTGCC GAACGATCAC CTCGCGTACA TGTACGCGTC GCTCGGCGTG ATCGTCGTCG GCAACGGCCT GTTCAAGGCC AACGCAGCGA ACCTCGTGCG CCGCATCTAC GAAGGCGACG ACGCGCGCAT CGACAGCGCG TTCACGATCT ACTACATGGC GGTCAACATC GGCTCGACGG TGTCGATGCT CGCGACGCCG TGGATCAAGG ATCACTGGGG CTGGCACACC GCGTTCGCGG TCTGCTGCGG CGGCATGCTG CTCGCGATCC TCAATTTCAT GCTGATGCAC CGCACGCTCG CGCACGTCGG CTCGCAGCCG GACGACGAGC CGATCCGCTG GAAGCGCCTC GGCGCGGTCG CGGCCGGCGG CGTCGCGCTC GCGCTGATCA CGCTGTACGT GCTGCAGCAC AAGCAGCTCG CGGTCGCCAG CGTGTGGATG GCGGCATTCG CGATCCTCGC GATCTTCGCG TACATGATCG CGAAGTCGGA GCGCTCGGAG CGCGCCGGCC TGATCGCGGC GCTCGTGCTG ATCGGCCAGG TGATCCTGTT CTTCATCTTC TACGTGCAGA TGTCGACGTC GCTGACGCTG TTCGCGCTGC GCAACGTCGA CCCGCGTTTC ATGCTGTTCG GCACGACGCT GTTCACGTGG AGCGCCGCGC AGTTCCAGGC GCTGAACCCG ATCTGGATCA TGCTGCTGAG CCCGGTGCTC GTGTGGGTCT ACAACGCCGT CGCGAAGGGC GGCCGCGACC TGCCGGTCGC CGCGAAGTAC GCGCTCGGTT TCGGCGCGGT GGCAGCCGGC TACCTGGTGT TCACGATCAG CGGCCGCTAC GCGGTCGACG GCCGTGTGTC GTCGTGGTTC ATGGTGTGGG GTTACGGCCT GTACTCGCTC GGCGAACTGC TGGTGAGCGG CCTCGGCCTC GCGATGATCG CCCGCTACGT GCCGGCGCGC ATGAGCGGCT TCATGATGGG TGCGTATTTC GTCGCGACGG GCGTGTCGCA GTATCTGGGC AGCGTCGTCG CAAACTTCGC GCAGATGCCG TCGCACGAAC TGCCGGCCAC CGAGTCGCTG CCGCTCTACC TGTCGCTGTT CGAGAAGCTC GGCTGGCTCG CCGCGATCGG CATGCTGCTC GCGCTGCTGC TGCTGCCGCT GATGAACCGC CTGTCGCGCC AGCATCAGCG CTGCACGGAA GAGCGCCGCG AAGAAGCGTT GCAGGCGCAA GCAGCGGCCG CCGCGCAGTA A
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Protein sequence | MMHAPVSQTR SFTTVFLIEM WERFGYYGMA ALLVLFMVDR LGFTDSHANL TWGAFTALVY AAPSIGGWIG DKVLGARRTM IIGASVLCAG YLMLAVPNDH LAYMYASLGV IVVGNGLFKA NAANLVRRIY EGDDARIDSA FTIYYMAVNI GSTVSMLATP WIKDHWGWHT AFAVCCGGML LAILNFMLMH RTLAHVGSQP DDEPIRWKRL GAVAAGGVAL ALITLYVLQH KQLAVASVWM AAFAILAIFA YMIAKSERSE RAGLIAALVL IGQVILFFIF YVQMSTSLTL FALRNVDPRF MLFGTTLFTW SAAQFQALNP IWIMLLSPVL VWVYNAVAKG GRDLPVAAKY ALGFGAVAAG YLVFTISGRY AVDGRVSSWF MVWGYGLYSL GELLVSGLGL AMIARYVPAR MSGFMMGAYF VATGVSQYLG SVVANFAQMP SHELPATESL PLYLSLFEKL GWLAAIGMLL ALLLLPLMNR LSRQHQRCTE ERREEALQAQ AAAAAQ
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