| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_5221 |
|---|
| Symbol | |
|---|
| ID | 4094779 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 2514498 |
|---|
| End bp | 2515400 |
|---|
| Gene Length | 903 bp |
|---|
| Protein Length | 300 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638018502 |
|---|
| Product | SMP-30/gluconolaconase/LRE-like region |
|---|
| Protein accession | YP_625068 |
|---|
| Protein GI | 107027557 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3386] Gluconolactonase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAACAGA CTCATCCGGC CGCGTCGGCG ACGCTGCTGG CCGACAGCCG CAACACGCTC
GGCGAAGGCG CGACGTGGTG CGACAGGACG CACACCCTGT ACTGGGTGGA CATCGAAGGC
GCGCGGCTGT GGCGCTGCCC GGCGGATGGC TCGGACCTCG TGCAATGGGC GATGCCCGAG
CGGCTCGCAT GCTTCGCGCT GACCGACGAT CCGGACGTGC TGTTGGTCGG GCTCGCGACC
CATCTCGCGT TTTTCGATCT GCGCAGCGGC GCGTTCACGC GGATCGTCGA CGTCGAGCCT
GAACTGCCCA CGCGGCTGAA CGACGGGCGC TGCGACGGGG CCGGCGCGTT CGTGTTCGGG
ATGAAGGACG AAGGCGCCGA GCCGCCGCGT GCGGTCGGCG GGTTCTATCG GCTCAATTCC
GACCTCACGC TCGAACGGCT CGCGTTGCCG CCGGCCGCGA TCGCGAACAG CATCGGATTC
TCGCCGGATG GTTCGAAGAT GTATTTCTGC GATTCGCTGG TGCGCGAGAT TTTCGTGTGC
GATTACCGCG CGGGTGGCGA TGTGGCCAAT GTGCGGCCGT TCGCGCGGCT GACGGATGTA
GACGGCGACC CGGACGGCTC GATCGTCGAT CGCGACGGCG GGTTGTGGAA TGCGCAGTGG
GGTGGGCGGC GCGTGGTGCG CTATGGGCCG GACGGGATCG AGACGGATCG CGTTGAAGTG
CCGACCGCGC AGCCGAGCTG TGTGGCGCTT GATGGTGACG GCCGGTTGTA TGTGACGAGT
GCGCGTGTTG ACCTGAGCGA CGATGCGCTG GCGAGCGACG CGCACGCGGG CGGCGTGTTC
GTCGCGCAAA CGCGGCACGT GGGGCTGCCG ACCGCACGGT TCGCGGGCAC GCCGCGTGGT
TGA
|
|---|
| Protein sequence | MQQTHPAASA TLLADSRNTL GEGATWCDRT HTLYWVDIEG ARLWRCPADG SDLVQWAMPE
RLACFALTDD PDVLLVGLAT HLAFFDLRSG AFTRIVDVEP ELPTRLNDGR CDGAGAFVFG
MKDEGAEPPR AVGGFYRLNS DLTLERLALP PAAIANSIGF SPDGSKMYFC DSLVREIFVC
DYRAGGDVAN VRPFARLTDV DGDPDGSIVD RDGGLWNAQW GGRRVVRYGP DGIETDRVEV
PTAQPSCVAL DGDGRLYVTS ARVDLSDDAL ASDAHAGGVF VAQTRHVGLP TARFAGTPRG
|
|---|
| |