Gene Bcen_5210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5210 
Symbol 
ID4095041 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2503040 
End bp2503978 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content66% 
IMG OID638018491 
Productouter membrane protein (porin) 
Protein accessionYP_625057 
Protein GI107027546 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3203] Outer membrane protein (porin) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00719172 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCGAA TCATCGTGGT TTCGGCGTTG GCATGCGTTG CAGCAGACGC GGTCGCGCAA 
TCGAGCGTGA CGTTGTTCGG TTACATCGGC GCGGGCGTGC GCTGGACCGA TGGCGTGAAA
GGGGGGAGTC AGATCGGGTT CGACAACAAC GCGATATCGG GCAACATTTT CGGCATCAAG
GGCGCCGAGG ATCTCGGCGG CGGCATGCAG GCGATCTTCA TGCTGCAGAG CGGGTTCCTG
ACGGGCACCG GTGCGCTGGC GAAATCGCCC GGCCTGCTGT TCTCGCAGAT GGCTTATGTC
GGCCTGAGCG GCCCATACGG CCGCGTCACG TTCGGACGGC AACTGAACGC GCTCGAGGAC
ATCGGCATTG CGCTCGACCC GAATTCCGCG CAAGGGCAGT CGCTGTCGAC GATCCCCGGC
GTGGTGTGGG GCGGCAACTT CTTCACGAAC GATTCGCGCT TCAACAACAC GATCAAGTAC
GTCGGCACGT TCGGCGGCGC GACCGTGCGC GGCAGCTATT CGCCCGGCGG GGTCGCCGGC
AATCAGCGCG CCGGCTCGAA CGTTGCCGTC GGCACGAGCT ACCGGTTCCG GACGCTGTTG
CTCGGCGCCG CCTATCAGAC GACCTGGAAC GCCGACGCAT CGCAATGGGC GCGCACGATC
ATGGGCGGTG CGACCTGGCA GGTCGGCCCG GCCCGGCTCT ACCTGAGCTA CAGCGATCTC
GCCGTCAGCG CCGCGAAGGC CGGCGCGCCG GAGCGGCGCG ACCGGATTCC GGCGGTCGGG
ATCGTCTATC AGGTCACGCC GTTCCTGCAA TTGTCCGGCG CGACCTATTA CGACTTCGCG
CAGAACCTGA AGAACACCGG CGGTGCGGAC GGCCGCAAGC TGACGTCGTA CGCGATGCTG
CAGTACTTCC TGTCGAAGCG GACCAGCCTG TATGCGTAG
 
Protein sequence
MKRIIVVSAL ACVAADAVAQ SSVTLFGYIG AGVRWTDGVK GGSQIGFDNN AISGNIFGIK 
GAEDLGGGMQ AIFMLQSGFL TGTGALAKSP GLLFSQMAYV GLSGPYGRVT FGRQLNALED
IGIALDPNSA QGQSLSTIPG VVWGGNFFTN DSRFNNTIKY VGTFGGATVR GSYSPGGVAG
NQRAGSNVAV GTSYRFRTLL LGAAYQTTWN ADASQWARTI MGGATWQVGP ARLYLSYSDL
AVSAAKAGAP ERRDRIPAVG IVYQVTPFLQ LSGATYYDFA QNLKNTGGAD GRKLTSYAML
QYFLSKRTSL YA