Gene Bcen_5197 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5197 
Symbol 
ID4095028 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2485867 
End bp2486733 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content58% 
IMG OID638018478 
Producthypothetical protein 
Protein accessionYP_625044 
Protein GI107027533 
COG category[E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0697] Permeases of the drug/metabolite transporter (DMT) superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTCTG AGAATACTTG GGCATTCGCG CTTGTTTGCG TGACCATACT CTGGGGCTGG 
TCATTTGTCG CAATTCATCA ATCTCTAGGG TTCGTCAGTG CATCAACGTT TAACGCATAT
CGCTTCCTGA TCGGCGCAGC GGCGATGTTC ATCGTGTTGA TGCGCCGCTG GCGACACGTC
GAATGGCGCG CAGGGCGGCG TGCCATATTG CCCGGCGTGG TCCTTTTCAT CGCATTCGCG
TTCCAGACAG CCGGCATCGC TTACACGACT GCATCCAACG CGAGCTTCAT TACGGGGCTC
GCGGTCATCT TCGCTCCAGC ATTTGGCTAC TGGATGCTCA AGATTCGGCC GAGCCGGCAA
CAGGTGATCG GTGCGGCGAT CGCCGCTGTT GGTCTTGCCA TGTTGACGAT GCGGGACCTT
TCGATACACG TCGGTGATGC ACTTGTTCTT GGGTGTGCTG TTTTCACGGC GCTGCACATC
GTAGTGCTAT CGAAGCGAAG CAAGGGCGCC GACGTCGAAC TGCTTGCATT CATCCAGGTA
TTGGTCGTAG GCGTACTGTC GCTGTTGTGG TCGTTGGCAT TCCACGAGTT TTCAGTTCCT
AACTCACCTC AGCCCGTCTG GACGGCGATC ATCGTCGGAA TCGGGGGGAC CGCGATCGGC
TATTTCGTGC AGACCCGGGC ACAGGTCGAA TCCGCACCTG GTCGAATCGC ACTGATCCTG
GTGCTGGAGC CCGTTTTCGG TGGGCTCTTC GGCTACGTCC TCGGTGGTGA TCGCCTGAGT
TCCATGAATT TCGCCGGCGC AGCGCTCATC ATCGCCGCGA TGTTCGTCAC GGAGTATCGC
CCTCGCTTAC GTGTGGTCAC GAATTGA
 
Protein sequence
MKSENTWAFA LVCVTILWGW SFVAIHQSLG FVSASTFNAY RFLIGAAAMF IVLMRRWRHV 
EWRAGRRAIL PGVVLFIAFA FQTAGIAYTT ASNASFITGL AVIFAPAFGY WMLKIRPSRQ
QVIGAAIAAV GLAMLTMRDL SIHVGDALVL GCAVFTALHI VVLSKRSKGA DVELLAFIQV
LVVGVLSLLW SLAFHEFSVP NSPQPVWTAI IVGIGGTAIG YFVQTRAQVE SAPGRIALIL
VLEPVFGGLF GYVLGGDRLS SMNFAGAALI IAAMFVTEYR PRLRVVTN