Gene Bcen_5082 details

Gene Information

• Locus tag: Bcen_5082
• ID: 4094237
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008061
• Strand: -
• Start bp: 2365732
• End bp: 2366457
• Gene Length: 726 bp
• Protein Length: 241 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 638018363
• Product: OmpW
• Protein accession: YP_624929
• Protein GI: 107027418
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG3047] Outer membrane protein W

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 0.133195
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAGCGAA TCAGCGCAGG AACCGTCGTA CTGGTCGCGG CCATCTCTGG CGCGCATGCT 
CAATCAGCCG GCCAGTGGGT AGTCAATGCC GGCTGGTCCC ATTTCGCGCC GCAGGGGTCG 
GCTGATCCGC TGACCGTCAA TGCGCTCGGC CAGTCACAAG TGATGACCGG CAGCGGTGGG 
GAGATCGCAA GCGGCGATAC GTTCGGCCTG ACCGCAACGT ACTTCCTGAC CGACCATATC 
GCGGCGACGA CGGTCATGGG TTTTCCGCCG ACATGGCACT TGAACGGCGC AGGTACGCTC 
AGCGGTTTCG GCGAGCTGGG GACCGCGCGG GCCTGGAGTC CGGCGATCAT CTTCAACTAC 
TACTTCGGCC AGCCGAATGC ACGGTTCAGG CCGTATCTGG GCGCCGGCGT CACCTACACG 
TGGTTCAGCA ACATCAAGCT CAGCAACCCC GTTTCCACCG GCCAGATCTA TTTCTCGCCG 
ACCGTCGGGA CAGCGCTCGA GGGGCCGACA TCCGTGTCAC TCAGCAATTC CTTTGCGCCC 
GTCGTCAACG GCGGCCTGAC CTACAACATC GATTCTCACT GGTCGATCAA CGCATCGGTG 
GCGTATTCGT GGGTATCGAC ACGCGCCACG CTCACTACCC GGTCATCCGT CGGCACGGTC 
ACGAGCACCA GCAAATTCCG GGTCAATCCG ATCGTGACGT TCCTTTCGGT CGGATACCGC 
TTCTGA 

 

Protein sequence

MKRISAGTVV LVAAISGAHA QSAGQWVVNA GWSHFAPQGS ADPLTVNALG QSQVMTGSGG 
EIASGDTFGL TATYFLTDHI AATTVMGFPP TWHLNGAGTL SGFGELGTAR AWSPAIIFNY 
YFGQPNARFR PYLGAGVTYT WFSNIKLSNP VSTGQIYFSP TVGTALEGPT SVSLSNSFAP 
VVNGGLTYNI DSHWSINASV AYSWVSTRAT LTTRSSVGTV TSTSKFRVNP IVTFLSVGYR 
F