Gene Bcen_5076 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_5076 
Symbol 
ID4094135 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp2360007 
End bp2360636 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content65% 
IMG OID638018357 
ProductTetR family transcriptional regulator 
Protein accessionYP_624923 
Protein GI107027412 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGACGAT TTAGTCCGGT TATTTCGGGA AGCATGGCGC GCACACGAAA CGAAAACCTT 
CACCAGCAAC GCCGCGAGCA GATCCTCACC GCGGCCGCCC GGGTCTTCAA GGCCAAGGGG 
TTCCACGGCG CGCGTACGGA AGATATCTGT GCGGCGGCCG ACATGAGCGC GGGCGCGGTG 
TTCCGGTATT TCGCCGACAA GCGCGAGATG ATCGACGCGA TCATCGCGGT CGAGGTCGAG 
CGTTATACGC AGGACTTCGA TCGCATCCTC AGCAAGGACG GGCTGCGTTG GCTGGCCAAC 
ATCACGGCCG ACGAACTGAC CGGGATGCTG GCGCAGGGCG ATGACGGCCT GGGTGTCGAC 
AGCTGGCTCG AACTCGCGCG CGATGCCGAG CGCCGCCCCG ATATCGTCGG GCTCGACCGG 
AAGATGCGCG CGGATCTCGC GGGCTTGCTG GCAAGCGGCC AGGCCGAAGG CTGGGTCAGG 
CCATCGCTGG ATCCGGCAGG CACGACGAAC ATCGTCTTCG CGATGTTCAA CGGCCTGTGG 
CTCGACCGCA GCCTCGGCAC GTCCGTCGAC ATGGAACGGA CGGCCGCCGC GCTTGGCGAT 
TTCTTCCGCA CCTGCGTACT GGTTGCCTGA
 
Protein sequence
MRRFSPVISG SMARTRNENL HQQRREQILT AAARVFKAKG FHGARTEDIC AAADMSAGAV 
FRYFADKREM IDAIIAVEVE RYTQDFDRIL SKDGLRWLAN ITADELTGML AQGDDGLGVD 
SWLELARDAE RRPDIVGLDR KMRADLAGLL ASGQAEGWVR PSLDPAGTTN IVFAMFNGLW 
LDRSLGTSVD MERTAAALGD FFRTCVLVA