Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4971 |
Symbol | |
ID | 4094030 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 2239157 |
End bp | 2240143 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638018253 |
Product | LysR family transcriptional regulator |
Protein accession | YP_624819 |
Protein GI | 107027308 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0570046 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATCTGA TTCAAAGCAT GCAGGCGTTC GTCACGCTCG CGGACGCGGG CACCTTCACC GAGACCGGCA AACGGCTCGG CATCACGACC GCGCACGTCA GCCGGCTCGT CGCGTCGCTC GAGCATCGTC TCGGCATCCG GCTGCTGAAC CGCACGACGC GCTCGATGTG CCTGACCGAA GCGGGCGAAC GCTATCTGGC GCGCGCCCGC GACATCACGC TGGCCGTCGA TGCGAGCGAG CGCGAGGCGC GCGACGCGCG CGTGCATCCG CATGGCCGGC TGCGCGCGCA TTGCAGCGCC AGCATCGCGA ACCATTTCGT GATTCCGCTG ATCGGGCAAT TCCAGGCGCG CTACCCGGAC GTGAGCGTCG ACCTGACGCT CGCGCCGCAC CTGCCGAAAC TGGTGCGCGA CAGCTACGAC GTCGCGGTGA TCGCGATGCC GAGCCTGCCG AGCTCCGAGC AGGTCGCGAT CGACGTCGGT CGCATCCGCA GCGTGCTGTG CGCGTCGCCC GCGTATCTCG ATGCGCACGG CATGCCCGAT TCGCCGGGCG CGCTGGTTCA CCATCGCTGC GTGCAACTGG TCGCGCCCGC GTATCACGAG CGCATCTGGA CGCTCTGGAA CGGTGCGGAA GCACAAACGG TGGACGTCGA TCCGTCGATG ACGGCCGACG TCGCCGCGTC GCTCGCGATC GCGGTGCGCG AAGGCGCGGG AATCGGCTTG CTGCCGGACT TCGTCGCCGC GGCCGACCTG CGCTCGGGCG CGCTCGTGCG CGTGCTGCCC GACTACCAGG CGGAGGAAAT CGGCGTGTTC CTGGTGTACG CGTCGCGCCA GCATCTCGAC GCGAAGACGC GCGCCTGGGT CGACTTCATG AAGGCCGCGC TGCGCGATGC GTTCGCACAA GCGCGCGACG ACGCGTGCGC ACCACCGGCC GGGAAAAAAA GCCACGCACC GGGCAAGGCC GGCGCGTGGG CCGGCGCGGC CGCGTAG
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Protein sequence | MDLIQSMQAF VTLADAGTFT ETGKRLGITT AHVSRLVASL EHRLGIRLLN RTTRSMCLTE AGERYLARAR DITLAVDASE REARDARVHP HGRLRAHCSA SIANHFVIPL IGQFQARYPD VSVDLTLAPH LPKLVRDSYD VAVIAMPSLP SSEQVAIDVG RIRSVLCASP AYLDAHGMPD SPGALVHHRC VQLVAPAYHE RIWTLWNGAE AQTVDVDPSM TADVAASLAI AVREGAGIGL LPDFVAAADL RSGALVRVLP DYQAEEIGVF LVYASRQHLD AKTRAWVDFM KAALRDAFAQ ARDDACAPPA GKKSHAPGKA GAWAGAAA
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