Gene Bcen_4967 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4967 
Symbol 
ID4094026 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp2233890 
End bp2235473 
Gene Length1584 bp 
Protein Length527 aa 
Translation table11 
GC content68% 
IMG OID638018249 
ProductEmrB/QacA family drug resistance transporter 
Protein accessionYP_624815 
Protein GI107027304 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00711] drug resistance transporter, EmrB/QacA subfamily 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.13795 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACCGCGG CGACCGCGCA GGCTGCGCAC GAAGATACCG TTTCGCTGCG CGCGTGGGTC 
GCCGTGCTCG GCGGCGTGTT CGGCTGCTTC ATGGCCGGCA TGAACGTGCA CGTGACCAAT
GCGTCGCTGC CCGACATCCG CGGCTCGCTC GGCGCGAGCT TCGAGGAAGG GTCGTGGATC
ACCACCGCGT ACCTGGTCGC CGAGATCGTC GTGATTCCGC TGACCGGCTG GCTCGTGCAG
GTGTTTTCCG CGCGACGCGT GCTGCTGGTC GGCGCGACCG GCTTTCTCGC GTTCTCGCTC
GCGTGCTCGG TCGCGCCGAG CATCTCGACG ATGATCATTG CGCGGGCGCT GCAGGGTGCG
TTCGGCGGCG TGCTGATTCC ACTGTCGTTC CAGCTGATCG TCACCGAATT GCCGCCGTCG
AAACATCCGC TCGGGATGGC GCTGTTCGCG ATCGCGAACA ACGTCGCGCA GGCGGCCGGG
CCGTCGGTCG GCGGCTGGCT CACCGACATG TATTCGTGGC GCTGGATCTT CTATCTGCAG
ATTCCGCCGG CGATCGCGCT GGTCGCGGCG ATCGGCTGGG CGATCCGGCC CGTGCCGGTG
CAGCTCGGGA TGCTCAGGCG GGCCGACTGG TTCGGCATCG CGACGATGGC GGTCGGCTTG
AGCGCGTTGC AGATCGTGCT GGAGGAAGGC GGGCGCAAGG ACTGGTTCGC GTCGGACCTG
ATCGTCGAGC TGTCGATCGT CGCGGCGCTC GGGCTGGCGG CGTTCGTCGC GATCGAGCTG
CGGCGCAAGG AGCCGTTCAT CAACCTGCGG CTGCTCGGCC AGTACAACTT CGGGATCGCG
AGCCTGATGC AGTTCCTGTT CGGCGCGGTG GTGTTCGGCG TGGTGTTCCT CGTGCCGAAC
TACTTCGCCG AGCTGCACGG CTACAGCGCG CGCGACATCG GCCTCGCGAT GATTCCGTAC
GGGCTCGTGC AGTTCGCGAT GTCGTTCCTC ACGCCGCCGC TGATGCGCCG CACCAGCCCG
CGGACGACGA TCGTGCTCGG CTTCGTGCTG GTCGCGGCCG GGTGCCTGAT GAACATTCAC
CTCGACGCCG ACGCTGCGTC GAACGTGATC GTCCCGTCGC TGATCGTGCG CGGGATCGGG
CAGTCGTTCG TCGTGATCGC GCTGGCCGTG ATGGCCGTCG ACGGAATCGA GAAGGCGCAG
CTCGGGTCGG CGTCGGGCGT GTTCAACATG GTCCGCAACG TCGGCGGCGC GATCGGCATC
GCGGTGATGA GCCAGATCGT CGTCGAGCGG CAGAAGCTGC ATGCGATGCG CATCGGCGAG
GCGGTCACGC CGTTCTCCGA GGCGTTCCAG GAGCGCATGG CGATGCTCGC GCGGCTGCTC
GCGCGCGTGC ATGCGCCGCG CGCGGACGTG CTGCCGGGCG GATCGTTCTC CGGCGTGCAT
GAACTTGCGC TGGGGCTCGT CAACCAGCGC GTGATGCGCG AGGCGCTGCT GATGGCGTAC
AGCGATACGT TCCTGATCGC GGGAATCGCG ATGATCGGGT GTACGGCGGC GGCGTTCATT
CTCAAGGGGA AGAAAAAGGC GTGA
 
Protein sequence
MTAATAQAAH EDTVSLRAWV AVLGGVFGCF MAGMNVHVTN ASLPDIRGSL GASFEEGSWI 
TTAYLVAEIV VIPLTGWLVQ VFSARRVLLV GATGFLAFSL ACSVAPSIST MIIARALQGA
FGGVLIPLSF QLIVTELPPS KHPLGMALFA IANNVAQAAG PSVGGWLTDM YSWRWIFYLQ
IPPAIALVAA IGWAIRPVPV QLGMLRRADW FGIATMAVGL SALQIVLEEG GRKDWFASDL
IVELSIVAAL GLAAFVAIEL RRKEPFINLR LLGQYNFGIA SLMQFLFGAV VFGVVFLVPN
YFAELHGYSA RDIGLAMIPY GLVQFAMSFL TPPLMRRTSP RTTIVLGFVL VAAGCLMNIH
LDADAASNVI VPSLIVRGIG QSFVVIALAV MAVDGIEKAQ LGSASGVFNM VRNVGGAIGI
AVMSQIVVER QKLHAMRIGE AVTPFSEAFQ ERMAMLARLL ARVHAPRADV LPGGSFSGVH
ELALGLVNQR VMREALLMAY SDTFLIAGIA MIGCTAAAFI LKGKKKA