Gene Bcen_4689 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4689 
Symbol 
ID4094117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1956220 
End bp1958451 
Gene Length2232 bp 
Protein Length743 aa 
Translation table11 
GC content68% 
IMG OID638017976 
ProductTonB-dependent siderophore receptor 
Protein accessionYP_624542 
Protein GI107027031 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4773] Outer membrane receptor for ferric coprogen and ferric-rhodotorulic acid 
TIGRFAM ID[TIGR01783] TonB-dependent siderophore receptor 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.141202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGTGA ATAGAACAAC AGCGGCGCCC GCACGGCGGC GGCGCGCGAA GGTCGGGCTC 
GGTGTCGGTC TCGGCGTCAC GCTTTTCGCG GCGCAGGCTG CCGTGGCCCA GGGCGACACG
CCCGCGCCGG GCACCGAAGC GGCCGGCAAC GCGACGTTGC CCGCGATCAC GGTGAGCGGC
GAGCGCGGCC AGCCGCTACG CGCGCGCGAA GCGTCGGTGG CCGGGCTCGA CGACGCGCCG
CTGCGCGACA CGCCGGCATC GGTGAACGTG ATCACGCGTG CGCTGATCGA CGATCAGCAG
GCGAAGCGGC TGAGCGACGT CGTGCGCAAC GATGCGTCGG TCGTCAACGA CTATGCGCCG
GTTGGCTATT TCGAAGGCTT CGCGATCCGC GGCTTTCCGG TCGATCTCGC GAGCGCGATT
CGGATCGACG GGCTGACGGT GTCCGGCGAG CAGAACGTGC CGCTCGAGAA CAAGGAGCGC
GTCGAGATCC TGAAAGGGCT CGCGGGCATC GACAGCGGCG TCGTCGCACC GGGCGGCGTG
ATCAACTTCG TGACCAAGCG TTCCGCGAAC GTCGCGAGCG TGACGGGCGG CGTCGACAGC
CGCGGCTCGA CGTCGGCGGC CATCGATCTC GGCCGCCGCT TCGGCCCCGA TCATCAGTTC
GGGTTCCGGA TCAATGCGGC GAAGGAGAAC ATGCACTCCT ATATCGACGG CACGAACGGG
CGGCGCACGT TCGGCTCGAT CGCCGCCGAC TGGGATATCA GCCCGCGCGC GAGCCTGCAG
CTCAATGCCG AATTCCAGCA GTGGATCCAG CGTTCCGCGC CCGGCTACCA GTTGCTCGGC
GGCACGGTCG TGCCGTCGGT CAAGACGACG TCGAAGGCGC TCGGCACGCA GCCGTGGGCG
AAACCCGTGA CGACCGATGC GCTGAACCTG AACGCGCGTT TCGACTACCA GTTCAACGAC
GACTGGAAGG CGTACGTCGC CGTGGGCCGT AGCCGCACGA TGATCGACGA CAACAGCGCG
TTCGCGTACG GCTGCTCGTA TGCGGCGAGC TGCGCGGCCG GCGCGACGTC GCCGTTCTTC
TTCGGCGCGA ACGGCGACTA CGACGTGTAC GACTTCCGCA GCCCCGGCGA ATACCGACGC
AACGACGATC TGCGCGCGGT CACGACCGGC AAGTTCGCGA CGGGGCCACT GCGGCACGAG
CTGACGCTCG GCGTGAGCGT GCAGCGCCGC GTCGTGCACA TGGCCGACGC CGTGTACGAC
TACGTGGGCA GCGAGAATAT CTACGGGCCC GACCTGACCT TTCCGCCGTC GCCGAATTCA
CCGGGGCCGT CGTATCCGCG CCTCGACGCG TGGCAGTACG GCGTGTTCGG GCTCGACCGC
ATCAGTATCG GCGAACACTG GCAAGTGCTC GCGGGCGGCA AGGAAGTGCT GCTGCGCCAG
CGCAGCTGGA GCAGCCTCGA CGGCGAGACG ACGCATACCG ACCGCTCGGT GTTCCTGCCG
CAGGTCGCGC TCGTCTACAA GCCGGTGAAC GTCCTGTCGC TGTATGCGTC GTACAGCAAG
GCGCTGTCGC TCGGCGACCA GGCGCCCGTG CGCGCGACCA ACGCATATGC GTTCCTGCCG
CCCGTCGAAT CGCACCAGAT CGAAGTCGGC GCGAAATACG ACTGGCTCGA TCGGCTGAGC
CTCACGGCCG CCGTGTTCTC GATCAGCAAG CCGTTCCAGT TCGCTGACCC GGATGCGTCG
GGCACGAGCT ACACGTTCGT GCAGCGCGGC ACTCAGCGGC ACCAGGGGAT CGAACTCGGC
GCGGCCGGGC GTGTGACCGA GCGGCTGGGC CTGACGGCCA GCGTCGCGGC GATTCGCGCC
CGCGCGGTCG ATTCGGGGTC GCCGGCCTAC GAAGGGCACC AGATCATCAA CGTGCCCGCG
CTGCGCGCGT CGCTGTATGC GGACTACGCG GTGCCGGGCG TCGCGGGCCT GAACGTGCTC
GGCGGCGTGG AATACAGCGC GGCGCGCAAC GCGAACGAGG AGGGCACCGC GCGCGTGCCG
TCGTGGTTCG TGTTCAATCT GGGCGCGCGT TATACGACCA AGATCGGCGG TCATCGCACG
GTGTTGCGCG TGTCGGTGGA CAATCTGTTC AACAAGTTCT ACTGGCGCGA CGCAGGCGAG
CAGCAGGGCG ATGCGTACCT GTTCCCCGGT GCGCCGCGCA CCGCGCGTGT ATCGTTGACC
TATGATTTCT GA
 
Protein sequence
MTVNRTTAAP ARRRRAKVGL GVGLGVTLFA AQAAVAQGDT PAPGTEAAGN ATLPAITVSG 
ERGQPLRARE ASVAGLDDAP LRDTPASVNV ITRALIDDQQ AKRLSDVVRN DASVVNDYAP
VGYFEGFAIR GFPVDLASAI RIDGLTVSGE QNVPLENKER VEILKGLAGI DSGVVAPGGV
INFVTKRSAN VASVTGGVDS RGSTSAAIDL GRRFGPDHQF GFRINAAKEN MHSYIDGTNG
RRTFGSIAAD WDISPRASLQ LNAEFQQWIQ RSAPGYQLLG GTVVPSVKTT SKALGTQPWA
KPVTTDALNL NARFDYQFND DWKAYVAVGR SRTMIDDNSA FAYGCSYAAS CAAGATSPFF
FGANGDYDVY DFRSPGEYRR NDDLRAVTTG KFATGPLRHE LTLGVSVQRR VVHMADAVYD
YVGSENIYGP DLTFPPSPNS PGPSYPRLDA WQYGVFGLDR ISIGEHWQVL AGGKEVLLRQ
RSWSSLDGET THTDRSVFLP QVALVYKPVN VLSLYASYSK ALSLGDQAPV RATNAYAFLP
PVESHQIEVG AKYDWLDRLS LTAAVFSISK PFQFADPDAS GTSYTFVQRG TQRHQGIELG
AAGRVTERLG LTASVAAIRA RAVDSGSPAY EGHQIINVPA LRASLYADYA VPGVAGLNVL
GGVEYSAARN ANEEGTARVP SWFVFNLGAR YTTKIGGHRT VLRVSVDNLF NKFYWRDAGE
QQGDAYLFPG APRTARVSLT YDF