Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4467 |
Symbol | |
ID | 4094643 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 1707298 |
End bp | 1708785 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638017754 |
Product | RND efflux system, outer membrane lipoprotein, NodT |
Protein accession | YP_624322 |
Protein GI | 107026811 |
COG category | [M] Cell wall/membrane/envelope biogenesis [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG1538] Outer membrane protein |
TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.419427 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCCT TCTCCCTGCC CCGCCGCCCC GCGCTCACCC TGTGTGCGGC CGCGTGCCTG CTCGCCGGCT GCACGGTCGG CCCCGACTAC CACGGCGCGC CCGCCGCACC GGATGCATCG ACCTTCGTGC GTGCGCCGGC CACTGGCGTC GACACCGCGT CGCCCGCACC GAGCGCGTGG TGGCATGCAC TGAACGATCG CCAGCTCGAC GCGCTGATCG TCGCCGCGCT CGTGTACAAC CCCGATCTGC ACGCCGCGCA GGCCCGCTTG CGCGCGGCAC GCGCACAGCT CTCGCAACAG CGCGCCGCGC AGATGCCGAA ATCGTCGGCC ACCGTCGCGG CCATCCGCAT GCGCGAGCCG GACGTCAGCG CGCTCGGCTC GCTGCTGCCG TCGAACGGCT CGGAGCAATC GGGCGGCACG TCGCCGTCGC TCGGCGGCTC GGGGCCGCTG CAACTCTATT CGGCGGGCTT CGACGCGACG TGGGAAATCG ACCTGTTCGG CGGCACGCGC CGCGCGGTCG AAGCCGCATC CGCCCAGGCC GAAGCGGTCG ATGCCGATCT CGCCGACACG CAGGTGTCGA TCGCGGCCGA AGTCGCGAAT GCGTATGTCG ACCTGCGCGA CCAGCAGCAA CGACTTGCGT TGTCGAAGCG CACCGCGCAA CTGCAACAGC AGATGCTCGA ACTGACGCAG CAGCGCCGCG CGCGCGGCGT CGCGGCCGAT GCCGACATCG AGCGACTGAC GACGCAGGTC GAGAACACGC GCGCGTCGCT GATCCCGCTC GACGCCCAGG TGACCGAATC GCTCGACCGG CTCGCGATCC TGACGGGCCG CGCGCCGGGC GCGCTCGACG CCGCGCTGTC GACCCCGGAC GCGGCATTGC CGACGCTGCC CGGCAGCGTC GCGATCGGCG ATCCGGCCAC GCTGCTGAAA CAGCGCCCCG ATATTCGCGC GGCCGAACGC CGGCTTGCGT CCAGCAATGC GCAGATCGGC GAGCATGTCG CCGACTATTT TCCGAAGGTG ACGTTGCTCG GCGATCTCGG CTTCAGCGCG ACGGACCCGG GCCATCTGTT CCGCAAGCAG AATTTCACGT GGGTCGGTGC GCCGTACCTG CAATGGAACA TTCTCGACTT CGGACGCACG CGTGGCGCGG TACGCGCGGC AGAAGCATCG CGCGATGAAG CGGAGGCGAA TTATCAGAAG GCCGTGCTCG GTGCATTACA GGATGCCAAC ACCGCGTTGC AGCGTTACGG GCATCAGCGC GAGCACGTCG TCGCATTGAC GAAGGTGCAG ACGTCGGCCG TTCATTCGCG CGCGCTGATG GACCAGCGCT ATCGCGCGGG CGTCGCGTCG ATGATCGACC TGCTCGATAC GCAACGTGAA GCGTTCGCCG CGCAGCAGAA CGTGATCGCC GGGCAGGCCG AACTGATCAA GAACTACGTG TCGGTGCAGA AGAGCCTCGG GCTCGGCTGG CAGACGAGCG CCGGTTGA
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Protein sequence | MKPFSLPRRP ALTLCAAACL LAGCTVGPDY HGAPAAPDAS TFVRAPATGV DTASPAPSAW WHALNDRQLD ALIVAALVYN PDLHAAQARL RAARAQLSQQ RAAQMPKSSA TVAAIRMREP DVSALGSLLP SNGSEQSGGT SPSLGGSGPL QLYSAGFDAT WEIDLFGGTR RAVEAASAQA EAVDADLADT QVSIAAEVAN AYVDLRDQQQ RLALSKRTAQ LQQQMLELTQ QRRARGVAAD ADIERLTTQV ENTRASLIPL DAQVTESLDR LAILTGRAPG ALDAALSTPD AALPTLPGSV AIGDPATLLK QRPDIRAAER RLASSNAQIG EHVADYFPKV TLLGDLGFSA TDPGHLFRKQ NFTWVGAPYL QWNILDFGRT RGAVRAAEAS RDEAEANYQK AVLGALQDAN TALQRYGHQR EHVVALTKVQ TSAVHSRALM DQRYRAGVAS MIDLLDTQRE AFAAQQNVIA GQAELIKNYV SVQKSLGLGW QTSAG
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