Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4445 |
Symbol | |
ID | 4094660 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 1680826 |
End bp | 1681671 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638017732 |
Product | binding-protein-dependent transport systems inner membrane component |
Protein accession | YP_624300 |
Protein GI | 107026789 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1177] ABC-type spermidine/putrescine transport system, permease component II |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.140944 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCGACCA TGAAACTCGC CAGGCCGCTG TTCGCGCCGC ACATGTCGTT CGTCGAGCGC GCGTGGTACG TCGCGTTGCG CGTGCTCGTC GTGCTGACGC TGCTGTACCT GATCCTGCCG GTGCTCGCGA TCGTGCCGCT GTCGTTCTCG TCGAGCACGT TCCTCGTGTA TCCGATTCCG GGTTTCTCGC TGCGCTGGTA CGAGAACCTG ATCGCATCCG ACGAGTGGCG CATGGCCGCG AAGAACAGCT TCATCGTCGC GCCGTCGGCG ACCGTCGTCG CGACCGTGCT CGGCACGCTC GCGGCCATCG GCCTGACGAA AGCCGATTTC CGCGGCAAGG GGCTGCTGAT GGCCGTGCTG CTGTCGCCGA TGATCGTGCC CGTCGTCGTG GTCGGCGTCG GCATGTACCT GTTCTTCGCG CCGCTCGGGC TCGCGAATAC CTACACGGGG CTGATCGCCG CGCATGCGGC ACTCGGCGTG CCGTTCGTCG TGACGACGGT GGCCGCGACG CTGCAGGGCT TCAACCAGAA CCTCGTACGG GCAAGCCTGT CGCTCGGCGC GAACCCGGTC ACGACGTTCT TCCGCGTGAC GCTGCCGGTG ATCGCGCCGG GCGTGATGTC GGGTGCTCTG TTCGCATTCG CGACGTCGTT CGACGAAGTG GTCGTCACGC TGTTCCTCGC CGGCGCGGAC CAGACGACGC TGCCGCGCCA GATGTTCACG GGCATCCGCG AGAACATCAG CCCGACGATC GCGGCGCTCG CCACGATCCT GATCATTTTC TCGACGAGCC TGCTGCTCGC GCTCGAATGG CTGCGCGGCC GCAATGCGCG GCGTGCGGTG ACCTGA
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Protein sequence | MPTMKLARPL FAPHMSFVER AWYVALRVLV VLTLLYLILP VLAIVPLSFS SSTFLVYPIP GFSLRWYENL IASDEWRMAA KNSFIVAPSA TVVATVLGTL AAIGLTKADF RGKGLLMAVL LSPMIVPVVV VGVGMYLFFA PLGLANTYTG LIAAHAALGV PFVVTTVAAT LQGFNQNLVR ASLSLGANPV TTFFRVTLPV IAPGVMSGAL FAFATSFDEV VVTLFLAGAD QTTLPRQMFT GIRENISPTI AALATILIIF STSLLLALEW LRGRNARRAV T
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