Gene Bcen_4445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4445 
Symbol 
ID4094660 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1680826 
End bp1681671 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content67% 
IMG OID638017732 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_624300 
Protein GI107026789 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1177] ABC-type spermidine/putrescine transport system, permease component II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.140944 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGACCA TGAAACTCGC CAGGCCGCTG TTCGCGCCGC ACATGTCGTT CGTCGAGCGC 
GCGTGGTACG TCGCGTTGCG CGTGCTCGTC GTGCTGACGC TGCTGTACCT GATCCTGCCG
GTGCTCGCGA TCGTGCCGCT GTCGTTCTCG TCGAGCACGT TCCTCGTGTA TCCGATTCCG
GGTTTCTCGC TGCGCTGGTA CGAGAACCTG ATCGCATCCG ACGAGTGGCG CATGGCCGCG
AAGAACAGCT TCATCGTCGC GCCGTCGGCG ACCGTCGTCG CGACCGTGCT CGGCACGCTC
GCGGCCATCG GCCTGACGAA AGCCGATTTC CGCGGCAAGG GGCTGCTGAT GGCCGTGCTG
CTGTCGCCGA TGATCGTGCC CGTCGTCGTG GTCGGCGTCG GCATGTACCT GTTCTTCGCG
CCGCTCGGGC TCGCGAATAC CTACACGGGG CTGATCGCCG CGCATGCGGC ACTCGGCGTG
CCGTTCGTCG TGACGACGGT GGCCGCGACG CTGCAGGGCT TCAACCAGAA CCTCGTACGG
GCAAGCCTGT CGCTCGGCGC GAACCCGGTC ACGACGTTCT TCCGCGTGAC GCTGCCGGTG
ATCGCGCCGG GCGTGATGTC GGGTGCTCTG TTCGCATTCG CGACGTCGTT CGACGAAGTG
GTCGTCACGC TGTTCCTCGC CGGCGCGGAC CAGACGACGC TGCCGCGCCA GATGTTCACG
GGCATCCGCG AGAACATCAG CCCGACGATC GCGGCGCTCG CCACGATCCT GATCATTTTC
TCGACGAGCC TGCTGCTCGC GCTCGAATGG CTGCGCGGCC GCAATGCGCG GCGTGCGGTG
ACCTGA
 
Protein sequence
MPTMKLARPL FAPHMSFVER AWYVALRVLV VLTLLYLILP VLAIVPLSFS SSTFLVYPIP 
GFSLRWYENL IASDEWRMAA KNSFIVAPSA TVVATVLGTL AAIGLTKADF RGKGLLMAVL
LSPMIVPVVV VGVGMYLFFA PLGLANTYTG LIAAHAALGV PFVVTTVAAT LQGFNQNLVR
ASLSLGANPV TTFFRVTLPV IAPGVMSGAL FAFATSFDEV VVTLFLAGAD QTTLPRQMFT
GIRENISPTI AALATILIIF STSLLLALEW LRGRNARRAV T