Gene Bcen_4415 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4415 
Symbol 
ID4094728 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp1649235 
End bp1650302 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content67% 
IMG OID638017702 
Product3-isopropylmalate dehydrogenase 
Protein accessionYP_624270 
Protein GI107026759 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0473] Isocitrate/isopropylmalate dehydrogenase 
TIGRFAM ID[TIGR00169] 3-isopropylmalate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGATTG CAGTGCTGCC CGGCGACGGC ATCGGTCCGG AAATCGTCAA TGAAGCGGTG 
AAGGTGCTGA ACGCACTCGA CGAGAAGTTC GAACTCGAAC AGGCGCCGGT CGGCGGCGCG 
GGCTACGAGG CGAGCGGCCA TCCGCTGCCC GACGCGACGC TGGCGCTCGC GAAGCAGGCC 
GACGCGATCC TGTTCGGCGC GGTCGGCGAC TGGAAGTACG ACTCGCTGGA GCGCGCGCTG 
CGCCCCGAGC AGGCGATTCT CGGGCTGCGC AAGCACCTCG AGCTGTTCGC GAACTTCCGC 
CCGGCGATCT GCTATCCGCA GCTCGTCGAT GCGTCGCCGT TGAAGCCGGA GCTCGTCGCG 
GGCCTCGACA TCCTGATCGT GCGCGAACTG AACGGCGACA TCTACTTCGG CCAGCCGCGC 
GGCGTGCGCG CGGCGCCGGA CGGCCCGTTC GCCGGCGAGC GCGAAGGCTT CGACACGATG 
CGCTATTCGG AGCCGGAAGT GCGCCGCATC GCGCACGTCG CGTTCCAGGC CGCGCAAAAG 
CGCGCGAAGA AGCTGCTGTC GGTGGACAAG TCGAACGTGC TGGAAACGTC GCAGTTCTGG 
CGCGACATCA TGATCGACGT GTCGAAGGAA TACGCGGACG TCGAGCTGTC GCACATGTAC 
GTCGACAACG CGGCGATGCA GCTCGCGAAG GCGCCGAAGC AGTTCGACGT GATCGTCACG 
GGCAACATGT TCGGCGACAT CCTGTCGGAT GAAGCGTCGA TGCTGACGGG TTCGATCGGC 
ATGCTGCCGT CGGCGTCGCT CGACAAGCAC AACAAGGGGC TGTACGAGCC GTCGCACGGT 
TCGGCGCCGG ACATCGCGGG CAAGGGCATC GCGAACCCGC TCGCGACGAT CCTGTCGGCC 
GCGATGCTGC TGCGCTACTC GCTGAATCGC GCGGAGCAGG CCGATCGCAT CGAGCGCGCG 
GTGAAAACGG TGCTCGAACA GGGTTATCGC ACGGGCGACA TCGCGACGCC GGGCTGCAAG 
CAGGTCGGCA CGGCGGCGAT GGGCGACGCG GTGGTCGCCG CGCTGTAA
 
Protein sequence
MKIAVLPGDG IGPEIVNEAV KVLNALDEKF ELEQAPVGGA GYEASGHPLP DATLALAKQA 
DAILFGAVGD WKYDSLERAL RPEQAILGLR KHLELFANFR PAICYPQLVD ASPLKPELVA 
GLDILIVREL NGDIYFGQPR GVRAAPDGPF AGEREGFDTM RYSEPEVRRI AHVAFQAAQK 
RAKKLLSVDK SNVLETSQFW RDIMIDVSKE YADVELSHMY VDNAAMQLAK APKQFDVIVT 
GNMFGDILSD EASMLTGSIG MLPSASLDKH NKGLYEPSHG SAPDIAGKGI ANPLATILSA 
AMLLRYSLNR AEQADRIERA VKTVLEQGYR TGDIATPGCK QVGTAAMGDA VVAAL