Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_4371 |
Symbol | |
ID | 4094841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 1594531 |
End bp | 1595871 |
Gene Length | 1341 bp |
Protein Length | 446 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638017661 |
Product | amino acid permease-associated region |
Protein accession | YP_624229 |
Protein GI | 107026718 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0531] Amino acid transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.670873 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAGCGT CGTCATCCCA TGAACCGGCA CGCCTGAAGC GCACGCTCGG CCTGCCGTCC GTGCTGCTGT TCGGCCTCGC CTATATGGCG CCGCTGATCG TCTACGGTAC CTACGGTGTG CTCGCGAAGG CCAGCGACGA TACGGCCGCG CTCGCCTATC TGCTCGCGCT GGTCGCCATC GCGTTCACCG CGCTCAGCTA CGGCAAGCTC GCGCGGCTCT ATCCGGCCGC GGGTTCGGCC TATACGTACA CGCGCAGGAC GTTCAACCCG CACCTGGGCT TCATGATCGG CTGGGCAACG CTGCTCGATT ATTTCTTCCT GCCGATGGTG ATCTGGCTGA TCGGTGCGGC GTATCTGAAC GCGGCATTTC CGCATGTGCC GACCTGGATC TGGATCGTCG CGTTCATCGT GCTGACGAGC GGGTTGAACA TCGTCGGCAT CGAACTGGCC GCGCGCTTCA ACATCGTGTT GATGGTCGTG CAACTGGCGA TCGTCGCGAT GTTCGTCGTG CTGTGCTGGC ACTATGCGTC GGCCGCGGCG GGGCCGGGCG GCATCGCGAT GGCGGAGCCG TTCTTCAAGC CGCACGTGCC GTTCGGCGCG ACGATGGCCG GCGCCGCGAT CGCCGCGTAT TCGTATCTCG GTTTCGACGC CGTCTCGACG CTGACCGAGG AAACGATCGA TCCGAAGAAG AACATGCCGC GCGCGATCCT GCTGATTGCG CTGATCGGCG GCGCGATCTT CGTGATCGCG GCGTATACGA TGCAGCTCGC GCACCCCGGC GTCGATTTCA AGGATACGGA TTCGGCCGCG TTCGAAGTGG CGAAGATGAT CGGCGGCGAC CTGTTCGTCA CCGTGTTCCT CGCGGGCCTG ATCCTCGCGC AGTTCGCGTC GGGCATCTCC GCGCAGGCAA GCGTCGGGCG GCTGCTCTAT GCGATGGGCC GCGATGAAAT CCTGCCGAAG CGCATCTTCG GGTTCATTCA TCCGCGCTTC AAGACGCCCG CGATCAACAT CGCGCTGGCC GGCGTCGTCG GGTTGATCGC GCTGAAGCTG GATGTCGCCA CCTCGACGTC GTTCATCAAC TTCGGCGCGT TCCTTGCCTT TACCGCCGTC AATCTGTGCG TGATTCGGCT GTATTTGTCG GGCAATCACG GCGAGCGCCG GATCGGCGTG TTCGGCGGAC TCGTCTTTCC CGCGATCGGT GCGGTGTCCG ATATCTGGCT GCTCGTGAGC CTCGAGAAGA CGGCGCTCGT GCTCGGCGTC GTGTGGTTCG CGCTCGGGCT CGTGTATCTG TGCTGGATCA CGCGGCTGTT TCGCCAGGCA CCGCCCGAAG TGGCGATTTG A
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Protein sequence | MQASSSHEPA RLKRTLGLPS VLLFGLAYMA PLIVYGTYGV LAKASDDTAA LAYLLALVAI AFTALSYGKL ARLYPAAGSA YTYTRRTFNP HLGFMIGWAT LLDYFFLPMV IWLIGAAYLN AAFPHVPTWI WIVAFIVLTS GLNIVGIELA ARFNIVLMVV QLAIVAMFVV LCWHYASAAA GPGGIAMAEP FFKPHVPFGA TMAGAAIAAY SYLGFDAVST LTEETIDPKK NMPRAILLIA LIGGAIFVIA AYTMQLAHPG VDFKDTDSAA FEVAKMIGGD LFVTVFLAGL ILAQFASGIS AQASVGRLLY AMGRDEILPK RIFGFIHPRF KTPAINIALA GVVGLIALKL DVATSTSFIN FGAFLAFTAV NLCVIRLYLS GNHGERRIGV FGGLVFPAIG AVSDIWLLVS LEKTALVLGV VWFALGLVYL CWITRLFRQA PPEVAI
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