Gene Bcen_4328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4328 
Symbol 
ID4094876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand+ 
Start bp1550705 
End bp1551352 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content69% 
IMG OID638017619 
Productisochorismatase hydrolase 
Protein accessionYP_624187 
Protein GI107026676 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0839951 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATC TTTCCCGTCA CGCCGAAGCG AACGTGTATC GCCAGCAGGG TTTCGGCACG 
CCGCTTCCGC CGCACGGCAA CATTGGACTG CTGATCGTCG ATTTCGTGGT CGGCTTCGCC 
GATCCCGCGA CGTTCGGCGG CGGCAACATC GCGCCGGCGA TCGCGCGCAC GACGAAGGCG 
CTCGCGCTCG CCCGCGAACG CGGCTGGCCG GTCGCGCACA GCCGCATCGT GTATGCGGAC 
GACGGCAGCG ACGACAACGT GTTTTCGCTG AAGGTGCCCG GCATGGCGAC GCTGACCGAG 
CATCATCCGA ACAGCGCGAT CGTGCCCGAG CTCACGCCGG CGCCGGGCGA ACTCGTCGTG 
CGCAAGACCG TGCCGTCCGC GTTCTTCGGC ACGCAGCTCG CGCCGTGGCT CGCGCAGCGC 
GCGGTGCAGA CGCTGCTCGT CGCGGGCGCC GTGACGAGCG GCTGCGTGCG CGCGAGCGTC 
GTCGACGCGA TGTCGCACGG GTTTCGCCCG CTCGTGCTCG CCGATTGCGT CGGCGATCGC 
GCGATCGCGC CGCACGACGC GAACCTGTTC GACATGCAGC AGAAATATGC GGCCGTGATG 
CCGCTCGACG ATGCGATCGC GGCAATCGAT GCCGTGCAGG CACGCTGA
 
Protein sequence
MNDLSRHAEA NVYRQQGFGT PLPPHGNIGL LIVDFVVGFA DPATFGGGNI APAIARTTKA 
LALARERGWP VAHSRIVYAD DGSDDNVFSL KVPGMATLTE HHPNSAIVPE LTPAPGELVV 
RKTVPSAFFG TQLAPWLAQR AVQTLLVAGA VTSGCVRASV VDAMSHGFRP LVLADCVGDR 
AIAPHDANLF DMQQKYAAVM PLDDAIAAID AVQAR