| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4195 |
|---|
| Symbol | |
|---|
| ID | 4094515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 1394341 |
|---|
| End bp | 1395048 |
|---|
| Gene Length | 708 bp |
|---|
| Protein Length | 235 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638017486 |
|---|
| Product | protocatechuate 3,4-dioxygenase, beta subunit |
|---|
| Protein accession | YP_624054 |
|---|
| Protein GI | 107026543 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
|---|
| TIGRFAM ID | [TIGR02422] protocatechuate 3,4-dioxygenase, beta subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.348592 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATTCCC CCACGATCCT CACGCCGCGC GACTGGCCGT CGCATCCGGC CTATGTCCAC
CCCGAGTACC GTTCGTCCGT GAAGCGCGGC CCGACCCGCC CGCTGATCCC GCTGAAGGAA
AAACTGCGCG ACCAGTACGC GCCCGTCTAC GGCGCGGAAG ATCTCGGCGC GCTCGACCAC
GACCTGACGA AGAACGCCGT GAAGAACGGC GAGCCGCTCG GCGAGCGGAT GGTCGTCACC
GGCCGCGTGC TCGACGAAGG CGGCAAGCCC GTGCGCAACA CGCTCGTCGA AGTGTGGCAG
GCCAACGCGG CCGGCCGCTA CGTGCACAAG GTCGACCAGC ACGACGCGCC GCTCGACCCG
AACTTCCTCG GCGCGGGCCG CTGCCTGACC GACGACGAAG GCCGCTACCG CTTCCTGACG
ATCAAGCCCG GCGCGTATCC GTGGGGCAAC CATCCGAACG CGTGGCGCCC GAATCACATC
CACTTCTCGC TGTTCGGCGA TTACTTCGGC TCGCGTCTCG TCACGCAGAT GTACTTCCCC
GGCGATCCGC TGCTCGCGTA CGACCCGATC TTCCAGGGCA CGCCGGAAGC CGCGCGCGAG
CGCCTGATCT CGCGCTTCTC GATGGACATC ACCGAAGAAG GCTATGCGCT CGGCTACGAA
TTCGACATCG TGCTGCGCGG CCGCGACGCC ACCCCGATGG AGCGCTGA
|
|---|
| Protein sequence | MDSPTILTPR DWPSHPAYVH PEYRSSVKRG PTRPLIPLKE KLRDQYAPVY GAEDLGALDH
DLTKNAVKNG EPLGERMVVT GRVLDEGGKP VRNTLVEVWQ ANAAGRYVHK VDQHDAPLDP
NFLGAGRCLT DDEGRYRFLT IKPGAYPWGN HPNAWRPNHI HFSLFGDYFG SRLVTQMYFP
GDPLLAYDPI FQGTPEAARE RLISRFSMDI TEEGYALGYE FDIVLRGRDA TPMER
|
|---|
| |