Gene Bcen_4176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_4176 
Symbol 
ID4095937 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp1371588 
End bp1372982 
Gene Length1395 bp 
Protein Length464 aa 
Translation table11 
GC content71% 
IMG OID638017469 
ProductOmpW 
Protein accessionYP_624037 
Protein GI107026526 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.504746 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAATC GCGACACCCG CCGCCCCCGC GCGCGGCCGG GCACCGTGCG TCCGCTGTCG 
CGCTGGCTCG GCGCGACGCT GTTCGCATGC GCGGCCGCCG CGCACGCCGC GCCGCAGCCC
GACGGCGACG CCCCACCGCG CTGGCAGGCC GGCGCCGACG GGATCGGCTT CTGGCCGGGC
GGCGATGCGG CTGGCTTCGA TGCGAGCGCA TGGATGACCG ATGCGGGGCC GGCGCGCGGC
GCACGCAACG AAGCTTCGGG CGACGAGCGG CAACCCGATA CCATTCCGCT GACCGCCCGC
AAGATCACGC TCGGGCAGCG AACCGGCGCG GCAGCGCGCG CCTGCGAGGC CGCCGGCGAC
GCGGGCGCGG ACGGCATCGG CTTCGACGAC GGCCGTACCG GCGGCGGCTG CGATCCGGCC
GCCACGCACG ATGCACCGGC CGGCGACGCA GCGGCGCGCG GCGTCGTCCA TGCCGACCGG
ATGCCGTACG AACTGCATCC GGTCGATCCA TCGCGGCTGC CCGATCTGCC GGCCGCGCAG
GCGCCGCCCT TGCTCGAGCA ACTGATGGGC GACGACCGCA ACATGGTCGG CCTCGGCTGG
CACTTCGTCG GGACGACCGG ACGCTCGACG CCCGTGACGA CGCGCACCGA CGCGCTCGGC
CTGAACAGTT TCCAGAACGC GGGTTCGAGC CTGTCACTCA GCAATACGAA CACGCTGGCG
TTCACGTTCA CGCATTTCGT CTCGGAGCAC TGGGCCGCCG AACTGGGCGC CGGCATTCCG
CCGGTGCTGA CGTTGCGCGG GCACGGCAGC ATCGCGCTGC CGCTCGACCG CATCTTTGCC
GGCGTCCACG GGCGCTTTCC GCTGATCGAT CTCGGCAACA CGCAAAGCAA TCCGCTCGCG
ACCACGCGGG CCTGGCTCGG CTCGGTCGTG TTCAAGTACT ACCTCGGCGA GCGCGACGAC
CGTTTCCGTC CGTTCGCGGG CATCGGCGTC AGCTACACGC GTTTCACGAA CACGAACCTG
AACCCCGTGT TCCAGCGCAA GCTCGCATCG CTCGGCGGGC TGCTCGCGGC CGGCGCGGAC
ATCGGCAGCC TGCAGTCGCT GCTGCTCGAT CCGGCGCTGT TCCAGCGGAT CTGGGATGCC
GGCGGCGACC TGCTGCTGTC GGGGCGGACC AATGTGTCGG CGAAGGTGAA GAGCGTCTGG
GAGCCGGTGT TCACCGTTGG CGCGAGCTAC CAGATCACGC GCCGGTTCTG GCTCACCGGG
ATGGTGACCT ACATCCCGCT GCGCACCCGG ATCACGCTCG ACATCAACCA GCCGAACCGC
CTGCTGGCGT CGAATACGTT CGATATTTCG GCGAACCCGG TGCTGGCCAC CGTCCTGCTG
AACTTCCGCT TCTGA
 
Protein sequence
MGNRDTRRPR ARPGTVRPLS RWLGATLFAC AAAAHAAPQP DGDAPPRWQA GADGIGFWPG 
GDAAGFDASA WMTDAGPARG ARNEASGDER QPDTIPLTAR KITLGQRTGA AARACEAAGD
AGADGIGFDD GRTGGGCDPA ATHDAPAGDA AARGVVHADR MPYELHPVDP SRLPDLPAAQ
APPLLEQLMG DDRNMVGLGW HFVGTTGRST PVTTRTDALG LNSFQNAGSS LSLSNTNTLA
FTFTHFVSEH WAAELGAGIP PVLTLRGHGS IALPLDRIFA GVHGRFPLID LGNTQSNPLA
TTRAWLGSVV FKYYLGERDD RFRPFAGIGV SYTRFTNTNL NPVFQRKLAS LGGLLAAGAD
IGSLQSLLLD PALFQRIWDA GGDLLLSGRT NVSAKVKSVW EPVFTVGASY QITRRFWLTG
MVTYIPLRTR ITLDINQPNR LLASNTFDIS ANPVLATVLL NFRF