| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4075 |
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| Symbol | |
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| ID | 4095816 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | + |
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| Start bp | 1250112 |
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| End bp | 1251623 |
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| Gene Length | 1512 bp |
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| Protein Length | 503 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 638017369 |
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| Product | RND efflux system, outer membrane lipoprotein, NodT |
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| Protein accession | YP_623937 |
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| Protein GI | 107026426 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | [TIGR01845] efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.147604 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCCCCC GCGTGCACCC GGCCGCGATC GGCGCCGTGG CGATCGTCGC GGCCGCGGTG
CTCGCCGGCT GCACGGTCGG CCCGGATTAC CGGCGCCCGC CCGTCGATAC GCCGGCCGCG
TGGCGGCTCG ACCCGGCCGA CGCATACTGG CAGCCGGCCG CGCCGGCCCG CGCGCCGCTC
GATCCCGCCT GGTGGACCGC GTTCGGCGAC GCCCAGCTCG ACGCACTGGA AGCCGACGCG
CTGCGCAACA ACCAGAACCT GAAGGCGATG GCCGCGCGCT ACGACCAGGC GAAGGCGACG
CTCGCGTCGG TGGCGTCCGC GCAGTATCCG GCCGTCGGGC TGAACGCAAG CGGCCAGCGC
TTCAAGATCT CCGCCGACCG GCCGCAGACC AACTACGCGA CGCAGAGCAT GTCGACCGTG
CAGAACGACA TCCAGGTGGG CGCGGCGGTC AGCTACGAAC TCGACCTGTT CGGCCGCGTG
CGGCGCAACG TCGAAGCCGC GCAGGCCAGC ACCGAGCAGT CGCGTGACGA TTTCGCAAAC
GCGCGCCTCG TGCTGAGCGC CGACCTCGCG TCGAGCTATT TCACGCTGCG CGAGCTCGAC
ACCGAGATCG ACGTCGTCAA GCGCTCGATC GACCTGCAAC AGAAGGCGCT CGATTACGTC
AGCGCGCGCC ACGACCTCGG CGCGGTGTCG GGCCTCGACC TGTTGCAGCA GCGCGCGCAG
CTCGACGCGA CCCGCACGCA GGCGCAATTG CTGATCCAGC AACGCGCGCA GGTCGAAACC
GCGATCGCGA CGCTGGTCGG TACGCCGGCT CCCGCCTTCT CGCTGCCGCC GCGCGTGGTG
CCGATCAACG CGCCCGCGCT GCCGACCGGG ATGCCGAGCG ACCTGCTGCA GCGGCGCCCC
GACGTCGCGT CGGCCGAGCG CGCGATGGCC GCCGCGAACG CGCAGATCGG CGTCGCGCGC
GCCGCGTATT TCCCGCGTAT CACGCTGTCG CCGGACATCG GCTGGGACGC GACCCGCTTC
GCGGGCCTGT TCACCGTGCC GGCACTGCTG TGGTCGGTTG GCGGCTCGCT CAGCCAGCCG
CTGTTCGAGG GCGGCAAGCT GAAGGCCGGC GTCGATTTCG CGCAGGCCGG CTACGTCGCC
GCGCAGGCCA GCTACCGGCA GACCGTGCTC ACCGCGTTCC AGGAGGTGCA AAATGCGGTG
ACCGGCCTGT CGGTGCTCGC GCAGGCCGCG CAGCAGGCTT CCGCGGCCGT CGACGACGCG
CGCAAGCTCG TATCGCTTGC GCAGGACCGC TACGCGGGCG GCCTGACGCC GTTCATCGAC
GTGCTGACGG CCCAGCAGCA GTTGCTGACG AGCGAGCGCC AGGCCGTGCA GATCCAGGGC
CAGCGCGCGG CGCTCGTGGT GTTTCTCGCG AAGGCGCTCG GCGGCGGCTG GGACGGCGAT
GCGGCGAGCG GCCTGGCGCC GTCCGACGTC GCGTCGGCGG CCCCGCAGCG CGGCGCGGGT
GTCGGCCCTT GA
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| Protein sequence | MRPRVHPAAI GAVAIVAAAV LAGCTVGPDY RRPPVDTPAA WRLDPADAYW QPAAPARAPL
DPAWWTAFGD AQLDALEADA LRNNQNLKAM AARYDQAKAT LASVASAQYP AVGLNASGQR
FKISADRPQT NYATQSMSTV QNDIQVGAAV SYELDLFGRV RRNVEAAQAS TEQSRDDFAN
ARLVLSADLA SSYFTLRELD TEIDVVKRSI DLQQKALDYV SARHDLGAVS GLDLLQQRAQ
LDATRTQAQL LIQQRAQVET AIATLVGTPA PAFSLPPRVV PINAPALPTG MPSDLLQRRP
DVASAERAMA AANAQIGVAR AAYFPRITLS PDIGWDATRF AGLFTVPALL WSVGGSLSQP
LFEGGKLKAG VDFAQAGYVA AQASYRQTVL TAFQEVQNAV TGLSVLAQAA QQASAAVDDA
RKLVSLAQDR YAGGLTPFID VLTAQQQLLT SERQAVQIQG QRAALVVFLA KALGGGWDGD
AASGLAPSDV ASAAPQRGAG VGP
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