| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4061 |
|---|
| Symbol | |
|---|
| ID | 4096075 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 1231556 |
|---|
| End bp | 1232401 |
|---|
| Gene Length | 846 bp |
|---|
| Protein Length | 281 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 638017355 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_623923 |
|---|
| Protein GI | 107026412 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.786818 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCTTCAC GCCATCCGGC CATCCTCATC GAAACGGAGC ACATCATGAC GCAAGCACAT
CGCGGTACCG CCCTCATTAC CGGCGCATCG TCGGGCATCG GCGCCGTCTA CGCGGACCGC
CTCGCGCGCC GCGGCTACGA CCTGATCCTG GTCGCACGCA ATCGCGACCG GCTGAGCGCC
CTCGCCGAGC GCATCACGAA CGACACGCAG CGCAGCGTCG AGATCGTCGA CGCGGACCTC
AACGACCGCG CGGCGCTCGC CGCCGTCGAA GCCAAGCTGA AACAGGACGC GAGCATCACG
CTGCTCGTGA ACAACGCGGG CATCGGCACG CATGCGCCGC TGCTCGACAG CGACGTCGAC
GCGATGACGC GGATGATCGA GCTGAACGTG ACCGCGCTCA CGCGCCTGAC CTATGCGGCC
GTGCCCGGCT TCGTCGCACG CGGCCGCGGC GCGGTGATCA ACATTGCGTC GATCGTCGCG
ATCTCGCCGG AAACGCTGAA CGGCGTGTAC GGCGGCAGCA AGGCGTTCGT GCTCGCGTTC
AGCCAGTCGC TGCATCACGA GCTCGCCGAC AAGGGCGTGC AGGTGCAGGC CGTGCTGCCC
GGCGCGACGG CCACCGAGTT CTGGCAGACG GGCGGCCTGC CGCTCGAGCA CCTGCCGAAG
GAAATCGTGA TGACGGCGCC GGACATGGTC GATGCGGCGC TGGTCGGGTT CGAGCGCGGC
GAGCTCGTGA CGATCCCGTC GCTGCACGCG GGCGACGAAT GGGAGGCATA CGAGGCCGCG
CGCCGCACGA TGGCGCCGCA TTTGTCGGCC AATACGCCGG CACCGCGCTA CACCACGGCG
CGCTAG
|
|---|
| Protein sequence | MPSRHPAILI ETEHIMTQAH RGTALITGAS SGIGAVYADR LARRGYDLIL VARNRDRLSA
LAERITNDTQ RSVEIVDADL NDRAALAAVE AKLKQDASIT LLVNNAGIGT HAPLLDSDVD
AMTRMIELNV TALTRLTYAA VPGFVARGRG AVINIASIVA ISPETLNGVY GGSKAFVLAF
SQSLHHELAD KGVQVQAVLP GATATEFWQT GGLPLEHLPK EIVMTAPDMV DAALVGFERG
ELVTIPSLHA GDEWEAYEAA RRTMAPHLSA NTPAPRYTTA R
|
|---|
| |