| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_4041 |
|---|
| Symbol | |
|---|
| ID | 4096147 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 1210454 |
|---|
| End bp | 1211401 |
|---|
| Gene Length | 948 bp |
|---|
| Protein Length | 315 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638017335 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_623903 |
|---|
| Protein GI | 107026392 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 0.325017 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGATACGC TACAAAACAT GCGGGTGTTT TCGCGCGTCG TCGAGACGGG CAGTTTCACC
GCCGCCGCGC AATCGCTGAA TTCGACGACG GGCGCGATGT CGCGCGCGGT GTCGGAGCTC
GAGGCGCGCC TGCGCACCCG TCTGATGAAT CGCTCGACGC GCCGTCTCGC GCTCACGTCG
GCCGGCGAAA GCTATCTGCG GCGCTGCCGC CAGATCCTCG CCGACGTCGA CCGCGCGGAA
GAAGAGGCGA GCTGCGCGCA CGAGCGCCCG GCCGGCGTGC TGCGCATGCA CAGCTTCGCG
AGCGTCGGGC ACCACTACGT ATTACCCGCG CTGACGCGCT ATCACGCGCA ATTCCCGGAC
GTGTCGATCG AGCTGTCGCT GTCGCAGCGG ATGCCTGACC TGTTCGACGG CACGAGCGAC
ATGGCCGTCG TCACCGCATC GTCGCTGCCT GATTCGGAGC TCGTGTCGCA CCTGCTCGGC
TCGACGTTCA GCATTCTGTG CGCATCGCCC GACTACGTGA AACGGCATGG CGTGCCGGCC
CGCCCGCAGG ATCTCGCCGC GCACGCGTGC CTGACGCTAT GTACGCCGGC GTTCCCGACG
CACGAATGGG TGCTCGAAGG GCCCGACGGC GTCGAGCAGA TCCATGTCGC CGGGCCGGTG
CAGACCAATA CGGCCGAATC GCTCGCCCTC GCGATCCGCG ACGGCATCGG GATCGGCATG
CTGCCGCTGT ATTCGGCAAT CGACGCGCTG CGCGACGGCA CGCTCGTCCG TGTGCTGCCC
GCGCATATCC TGCAGAAGAT GAACGTGTAT GCGCTGTACC CGTCGCGCCG CTTCGTCGAT
GCGAAGGTGC GGACCTGGGT CGAGATGCTG CGTGCGCAGG TGCCGACGAT GATCGCGCGC
GACGTCGAGA TGCTGAACGC GATCGACCGC GAACCGCAGG CCGCCTGA
|
|---|
| Protein sequence | MDTLQNMRVF SRVVETGSFT AAAQSLNSTT GAMSRAVSEL EARLRTRLMN RSTRRLALTS
AGESYLRRCR QILADVDRAE EEASCAHERP AGVLRMHSFA SVGHHYVLPA LTRYHAQFPD
VSIELSLSQR MPDLFDGTSD MAVVTASSLP DSELVSHLLG STFSILCASP DYVKRHGVPA
RPQDLAAHAC LTLCTPAFPT HEWVLEGPDG VEQIHVAGPV QTNTAESLAL AIRDGIGIGM
LPLYSAIDAL RDGTLVRVLP AHILQKMNVY ALYPSRRFVD AKVRTWVEML RAQVPTMIAR
DVEMLNAIDR EPQAA
|
|---|
| |