Gene Bcen_3987 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3987 
Symbol 
ID4094503 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand- 
Start bp1154821 
End bp1155459 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content71% 
IMG OID638017281 
Producthypothetical protein 
Protein accessionYP_623849 
Protein GI107026338 
COG category[S] Function unknown 
COG ID[COG3652] Predicted outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.498228 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCACAA ACCGAACAAT CCGGAGGATG AAGCGGGGCG GGCGTCGGCC AGTGGCGGTC 
GTCACGCTGA CTGCCGCCGC CGGCGTCCTG ACGTTCGCGT TCTCGCACGC GCAAGCGCCG 
CCCGCTTCGT CCGCGCAGGT CGCGCCGGGC GTCATCCGTC CCGGCCCCAC CGCCGACGAG 
CCCGGCCTGA CGCAGCGGCC GATCGGCATC GACGCCGAGT TCGTCGACAA GGCGGGCATG 
CTCGGCAAGG TGGAGCGACA GGCCAGCCAA CTCGCGCTCG ACCGTTCGTC GAACGCGGAC 
GTGAAGGCCT TCGCGCGCCG AATGCTCGAC GATCACGCGC GTATCGCGGA CGAATTGCGC 
CACATCGGTG CGCAGAAAGG CGTGCCGGTC CAGACGCGGA TGCTCGTCGA TCCGGCGGTC 
ACGGCATTGC GAGCGAAGGA CGGGCGCGCG TTCGATACGG CGTACGTGGC GCTGGCCGGG 
CCGAGCGCCC ACGAAGCGGC GATCCGGCTT TACGAAACCG AGGCGAAAGA CGGCCGCGAC 
CCGCAGCTTC GCGCGTTCGC GGCCCGCACG CTGCCGGTGT TGAACGCACA CCTGAACGCC 
GCGCGGCAAC TCGCGAAGAG GGTGGCCGCC GCGCAGTGA
 
Protein sequence
MSTNRTIRRM KRGGRRPVAV VTLTAAAGVL TFAFSHAQAP PASSAQVAPG VIRPGPTADE 
PGLTQRPIGI DAEFVDKAGM LGKVERQASQ LALDRSSNAD VKAFARRMLD DHARIADELR 
HIGAQKGVPV QTRMLVDPAV TALRAKDGRA FDTAYVALAG PSAHEAAIRL YETEAKDGRD 
PQLRAFAART LPVLNAHLNA ARQLAKRVAA AQ