| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3943 |
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| Symbol | |
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| ID | 4096245 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | - |
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| Start bp | 1110102 |
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| End bp | 1111589 |
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| Gene Length | 1488 bp |
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| Protein Length | 495 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638017237 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_623805 |
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| Protein GI | 107026294 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACGGCCG CGCTGCGTCC GTCGATGCTC GTGACGCTGT TCGAGGACGT GCGCCCGATG
GCGCTGTCCG GGCTCGCGAG CGGCTTCGTC GCGGCCGTCG CGCTGATCCG GCTGCAGCAG
CTGTGGTGCC TCGCGTGGCT CGTCGTCGAC GTCGGCCTGC TCATTGCGCG CCTGTCGATC
GCACGGGCCT ACACGGTACG GCGCAACGCC GGCGACGATC GCGCCGAATA CTGGGCGAAG
CGCTATGCGC CGGTGTCGCT CGTTGCCTGC TTCGTGCTCG GCCTCGGCGT GATGGGCTGC
GTGCAGGCCA CCGACGTCGA ACTCGGCACG CTGTCCGTGA TGGTCGCAGG CGGCGTGTTC
GGCGGGATCG CGTCGCGCAA TTCGGCGCTG CCGCGGCTCG CGATGACGCA GGTCGTGCTC
GGCGTGCTGC CGATCGGCGT CGGTGCGCTG CTGGCCCCTC GGCCGGGTGC CTGGCTGCTG
GTGCCGCCGC TCGCGATCTA TCTCGCGGCA ATGCGCACGG TCGTCCAGCG CCACTACCGC
GTGCTCGTCG CGCTGATCGC CGCGCGCCAG CGCAACGCCG AACTCGTCGC CCGCTTCGAC
GCCGCCCTCA CCTACATGCC GCACGGCCTG TGCATGATCG ACGGCGACAG CCGCGTGATC
GTCGCGAACC GTCGGACCGC GCAACTGTTC GGCTCGCCGC GCGAGATCAT GCTCGATACG
CCGTTGCCCG CCGTGGTCGC CGCGCTCGGC ACCGATGCCG TGATCGATCC CGGCGGCGCC
GGCCTCGCCG CGCAGTGCGA CAGCTGGCTG AGCCGCCACG AACCCGGGCC GCTCGACATC
GCGCTCGCCG ACGGCCGCCA GCTCGAACTG ACGCGCCACC GCGTGCCGGA CGGCAACGCG
GTGATCATCG TCGAGGACGT CACCACACGC CGTCAGACTG AACAGCACAT CCGGCACCTC
GCGCGACACG ACGCGCTGAC GGGGCTGCCG AATCGCCACG AACTGCACGC CGAGCTCAAG
CGAATGCTCG CGCGCCGGCC GCGGCTGCCG AGCCCGGCAT TCGCCGTCAT GTATCTCGAC
CTCGACGGTT TCAAGTCGAT CAACGACCGC TTCGGCCACC AGGCCGGCGA CGAAGTGCTC
ACGCAAGTCG CCGAGCGGCT CGGCAAGACG CTGCCGCCGG GCGAGCTCGC CGCGCGCATC
GGCGGCGACG AATTCATCGT CGCGATCGAC GACACGACGA TGCAAGCGTG CTCGATCCTC
GCCGCGCGGA TCATCCGGCA GATTTCGGCG CCGTACGCGC TGTCGATCGG CGAGACCGTC
TGCATCGGTA TCAGCATCGG CATCGCGCTC GACGACGGGC ACGGCTCGCC CGACGAGCTG
ATCCGGCAGG CCGACAGCGC GCTGTACGAC GCGAAGTCGG CCGGCAAGGG CATCTACTGC
TTCTACTCGA GCGGCAGCCG CCGCATGGCG CCGGCCGCCG CCAGTTGA
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| Protein sequence | MTAALRPSML VTLFEDVRPM ALSGLASGFV AAVALIRLQQ LWCLAWLVVD VGLLIARLSI
ARAYTVRRNA GDDRAEYWAK RYAPVSLVAC FVLGLGVMGC VQATDVELGT LSVMVAGGVF
GGIASRNSAL PRLAMTQVVL GVLPIGVGAL LAPRPGAWLL VPPLAIYLAA MRTVVQRHYR
VLVALIAARQ RNAELVARFD AALTYMPHGL CMIDGDSRVI VANRRTAQLF GSPREIMLDT
PLPAVVAALG TDAVIDPGGA GLAAQCDSWL SRHEPGPLDI ALADGRQLEL TRHRVPDGNA
VIIVEDVTTR RQTEQHIRHL ARHDALTGLP NRHELHAELK RMLARRPRLP SPAFAVMYLD
LDGFKSINDR FGHQAGDEVL TQVAERLGKT LPPGELAARI GGDEFIVAID DTTMQACSIL
AARIIRQISA PYALSIGETV CIGISIGIAL DDGHGSPDEL IRQADSALYD AKSAGKGIYC
FYSSGSRRMA PAAAS
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