Gene Bcen_3837 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3837 
Symbol 
ID4095513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp991159 
End bp992247 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content70% 
IMG OID638017134 
Productsodium/calcium exchanger membrane region 
Protein accessionYP_623702 
Protein GI107026191 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0387] Ca2+/H+ antiporter 
TIGRFAM ID[TIGR00378] calcium/proton exchanger (cax)
[TIGR00846] calcium/proton exchanger 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0780669 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCGCTCT CGTCCAACCA GCTCCCGCGC TGGACCCTCT GGGCCCCGCT TGCCGCCTGG 
CTGGTACTCG CGCTGTCGCG CGTCGTGCCG GCCGAAGGCC TCGTCATCGC GGTGTTCGCC
GCCGCGCTCG CCGGCGCCGT GTTCGCCGCC GTCCACCATG CGGAAGTCGT CGCGCACCGT
GTCGGCGAAC CGTTCGGCAC GCTCGTGCTC GCGGTCGCCG TGACCGTCAT CGAAGTCGCG
CTGATCGTAT CGGTGATGCT CGGCGCGGGC CCGGAAAAAT CGGGCCTCGC CCGCGACACC
GTCTACGCCG CCGTGATGAT CATCTGCAAC GGCATCGTCG GCATCTGCCT GCTGGTCGGC
GCATGGAAGC ACGGCGAACA GGACTTCCAG GGGCGCGGCG CGAGCAAGGC GCTCGCGGTG
CTCGCGTCGC TGTCGGTGCT GTCGCTCGTG ATGCCGAACT ACCTGAGCGC CGCCCCGGGC
CCGTTCTTCT CGAAATCGCA GCTCGCGTTC GCCGGCGTCG CATCGCTCGT GCTGTATGGC
GCGTTCGTGT TCGTGCAGAC CGTGCGCCAC CGCGACTACT TCCTCGCCGC GCACGACACC
GCCGACGAAG CGGTGCACGC GGCGGCGCCG AGCAACCGCA CCGCGATCAC CAGCATGGTG
CTGCTGTTCG CGAGCCTGGT CGCGGTCGTG CTGCTCGCGA AGCTGCTGTC GCCGGCCGTC
GAGCATGCGG TGCTGAAGCT CGGCGCGCCC GAAGCCGCGG TCGGTATCGT GATCGCCGCG
CTCGTGCTGC TGCCGGAAGG GCTCGCGGCC GTCACCGCCG CGCGCGCGAA CCGCCTGCAG
ACCAGCATGA ACCTCGCGCT CGGTTCGGCG CTCGCGAGCA TCGGGCTCAC GATCCCGACC
GTCGCGGCCG TGTTCATCTG GGTCGGCCAG CCGCTCACGC TCGGGATCGG CGCAATGGAG
ACGGTGCTGC TCGCGCTCAC GCTGCTGGTC AGCACGCTCA CGCTGAGCCA GGGGCGCACG
ACGGTGCTGC ACGGCGTCGT GCACGTCGCG CTGTTCGCCG CCTATCTGTT CCTGTCGTTC
ACCCACTGA
 
Protein sequence
MPLSSNQLPR WTLWAPLAAW LVLALSRVVP AEGLVIAVFA AALAGAVFAA VHHAEVVAHR 
VGEPFGTLVL AVAVTVIEVA LIVSVMLGAG PEKSGLARDT VYAAVMIICN GIVGICLLVG
AWKHGEQDFQ GRGASKALAV LASLSVLSLV MPNYLSAAPG PFFSKSQLAF AGVASLVLYG
AFVFVQTVRH RDYFLAAHDT ADEAVHAAAP SNRTAITSMV LLFASLVAVV LLAKLLSPAV
EHAVLKLGAP EAAVGIVIAA LVLLPEGLAA VTAARANRLQ TSMNLALGSA LASIGLTIPT
VAAVFIWVGQ PLTLGIGAME TVLLALTLLV STLTLSQGRT TVLHGVVHVA LFAAYLFLSF
TH