Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3837 |
Symbol | |
ID | 4095513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 991159 |
End bp | 992247 |
Gene Length | 1089 bp |
Protein Length | 362 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638017134 |
Product | sodium/calcium exchanger membrane region |
Protein accession | YP_623702 |
Protein GI | 107026191 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0387] Ca2+/H+ antiporter |
TIGRFAM ID | [TIGR00378] calcium/proton exchanger (cax) [TIGR00846] calcium/proton exchanger |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0780669 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCCGCTCT CGTCCAACCA GCTCCCGCGC TGGACCCTCT GGGCCCCGCT TGCCGCCTGG CTGGTACTCG CGCTGTCGCG CGTCGTGCCG GCCGAAGGCC TCGTCATCGC GGTGTTCGCC GCCGCGCTCG CCGGCGCCGT GTTCGCCGCC GTCCACCATG CGGAAGTCGT CGCGCACCGT GTCGGCGAAC CGTTCGGCAC GCTCGTGCTC GCGGTCGCCG TGACCGTCAT CGAAGTCGCG CTGATCGTAT CGGTGATGCT CGGCGCGGGC CCGGAAAAAT CGGGCCTCGC CCGCGACACC GTCTACGCCG CCGTGATGAT CATCTGCAAC GGCATCGTCG GCATCTGCCT GCTGGTCGGC GCATGGAAGC ACGGCGAACA GGACTTCCAG GGGCGCGGCG CGAGCAAGGC GCTCGCGGTG CTCGCGTCGC TGTCGGTGCT GTCGCTCGTG ATGCCGAACT ACCTGAGCGC CGCCCCGGGC CCGTTCTTCT CGAAATCGCA GCTCGCGTTC GCCGGCGTCG CATCGCTCGT GCTGTATGGC GCGTTCGTGT TCGTGCAGAC CGTGCGCCAC CGCGACTACT TCCTCGCCGC GCACGACACC GCCGACGAAG CGGTGCACGC GGCGGCGCCG AGCAACCGCA CCGCGATCAC CAGCATGGTG CTGCTGTTCG CGAGCCTGGT CGCGGTCGTG CTGCTCGCGA AGCTGCTGTC GCCGGCCGTC GAGCATGCGG TGCTGAAGCT CGGCGCGCCC GAAGCCGCGG TCGGTATCGT GATCGCCGCG CTCGTGCTGC TGCCGGAAGG GCTCGCGGCC GTCACCGCCG CGCGCGCGAA CCGCCTGCAG ACCAGCATGA ACCTCGCGCT CGGTTCGGCG CTCGCGAGCA TCGGGCTCAC GATCCCGACC GTCGCGGCCG TGTTCATCTG GGTCGGCCAG CCGCTCACGC TCGGGATCGG CGCAATGGAG ACGGTGCTGC TCGCGCTCAC GCTGCTGGTC AGCACGCTCA CGCTGAGCCA GGGGCGCACG ACGGTGCTGC ACGGCGTCGT GCACGTCGCG CTGTTCGCCG CCTATCTGTT CCTGTCGTTC ACCCACTGA
|
Protein sequence | MPLSSNQLPR WTLWAPLAAW LVLALSRVVP AEGLVIAVFA AALAGAVFAA VHHAEVVAHR VGEPFGTLVL AVAVTVIEVA LIVSVMLGAG PEKSGLARDT VYAAVMIICN GIVGICLLVG AWKHGEQDFQ GRGASKALAV LASLSVLSLV MPNYLSAAPG PFFSKSQLAF AGVASLVLYG AFVFVQTVRH RDYFLAAHDT ADEAVHAAAP SNRTAITSMV LLFASLVAVV LLAKLLSPAV EHAVLKLGAP EAAVGIVIAA LVLLPEGLAA VTAARANRLQ TSMNLALGSA LASIGLTIPT VAAVFIWVGQ PLTLGIGAME TVLLALTLLV STLTLSQGRT TVLHGVVHVA LFAAYLFLSF TH
|
| |