Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3641 |
Symbol | |
ID | 4095223 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 767052 |
End bp | 767660 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638016938 |
Product | autoinducer synthesis protein |
Protein accession | YP_623506 |
Protein GI | 107025995 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism [T] Signal transduction mechanisms |
COG ID | [COG3916] N-acyl-L-homoserine lactone synthetase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000011065 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACCT TCGTTCACGA GGAAGGGCGG TTGCCACACG AACTCGCGGC GGATCTCGGG CGCTATCGGC GCCGTGTGTT CGTCGAACAG CTCGGTTGGG CGCTCCCGTC GGCGAACGAA AGTTTCGAGC GTGACCAGTT CGATCGCGAC GATACCGTGT ACGTGTTCGC GCGAAACGCC GACGGTGACA TGTGCGGATG TGCGCGCCTG CTGCCGACGA CGCGCCCGTA TCTGCTGAAG TCGCTGTTCG CCGACCTGGT CGCCGAGGAC ATGCCGCTGC CGCAATCGGC CGCCGTCTGG GAGTTGTCCC GATTCGCGGC GACCGACGAC GAAGGCGGCT CCGGCAACGC GGAGTGGGCC GTGCGTCCGA TGCTCGCGGC CGTCGTCGAG TGCGCGGCGC AGCTCGGCGC GCGGCAGCTG ATCGGCGTGA CGTTCGCGAG CATGGAGCGG CTGTTCCGCC GGATCGGCAT ACACGCGCAC CGCGCAGGCC CGCCGAAGCA GGTAGACGGG CGTCTGGTGG TCGCGTGCTG GATCGACATC GATCCGCAAA CGTTTGCTGC GCTAGGAATA GAGCCGGGGC AGACTACCCG GCAAGCTATC GCCGCCTGA
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Protein sequence | MQTFVHEEGR LPHELAADLG RYRRRVFVEQ LGWALPSANE SFERDQFDRD DTVYVFARNA DGDMCGCARL LPTTRPYLLK SLFADLVAED MPLPQSAAVW ELSRFAATDD EGGSGNAEWA VRPMLAAVVE CAAQLGARQL IGVTFASMER LFRRIGIHAH RAGPPKQVDG RLVVACWIDI DPQTFAALGI EPGQTTRQAI AA
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