Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3601 |
Symbol | |
ID | 4095472 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 727447 |
End bp | 728619 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638016899 |
Product | porin |
Protein accession | YP_623467 |
Protein GI | 107025956 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGAAGA GGCTGACATG GGGCGCTGCG TGCCTGGCGC TGGGCGCCGG AAGTGCCTGC GCGGTGCCGT ATCAGGACGT ACTGCTTGCG GCGGTGCCGG AGTTCAACGG CGGATTGAAG GAGGGTGTGG CGCTGTACGG CTCGGTCGAC ATGGGGATCA ACTACCAGTC GGTGGGTGGA CGGTCGACGT GGCAGACCCA GAGCGGCGGC GAGTGGACGT CGAAATTCGG CTTCTTCGGG CGCGAGAATC TCGGCGGCGG GTGGCGCGCC GAATTCAATC TCGAAAGCGG TTTTCTCGCG AACAACGGCG CGCAGCAGGA TACGCAGTCG TTCTTCAACC GGCAGTCGTG GATCGGCCTG ATGTCCGACC GCTATGGCCG GCTGCGGCTC GGCAAGCAGA TCGGCACGGG GCTGCCGCTG TTCATCGACG TGTTCGGCAC CGTGGGCACC AATTCGGTGT ACACGTGGCT TGGCGCGGCC GCCGTGCAGA CGGCGCGCGG CGTCGGCTAC AACAGCGACC TCGGACCGGG CGCGACACAA CTGCCGGCGC GCGTCGACAA CGCGATCACC TATCGGACGC CGATCGTGGC CGGCACCACG ACGCTGATGC TGATGTACGC GCCCAGCAAC GTCGCGGGGC GCGCGCCGGC CGCGTCCGCG CAGGGCGCGC TGCTGCAGTG GTACAACGGC ACGACCTATC TGGCGGCGAG CTACAACCAG GTGTGGGGCG TCAACGGGGC GAGCACGGTA CGCAACGACC TGTACGGGCT TGGCGCCGTC TACGACACCG GGCGGCTCGT GCTGTCCGCG TCGTTCAATC AATATGCGCC GAAACTTGCC GGCGACGGGA TCGCACGCGT GTACACCCTC GGCACGATCG TGCCGTTCGG CGTGAATGCG GTTCGCGCGT CGATCGTCTA TCGCGATACG TCGGGCGTGC GCGATGCCGC CGGCCGGCCG GCGAAGGATT CGGCGCTCGG CGTCATGCTC GGCTACGACT ACCTGTTGTC CAAACGTACC GGCCTCTACG CGCGGACGGG GTTCATCCGC AATTACGGGA TGTCGACCGT TCTGCTGAAC GGCAATCCGT TGCCGACCGA GCCCGGCGGC ACGACGCCGC GCACCGGCAT GACGCCCGTG ACGATGTCGC TCGGCATGTA TCACAACTTC TGA
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Protein sequence | MKKRLTWGAA CLALGAGSAC AVPYQDVLLA AVPEFNGGLK EGVALYGSVD MGINYQSVGG RSTWQTQSGG EWTSKFGFFG RENLGGGWRA EFNLESGFLA NNGAQQDTQS FFNRQSWIGL MSDRYGRLRL GKQIGTGLPL FIDVFGTVGT NSVYTWLGAA AVQTARGVGY NSDLGPGATQ LPARVDNAIT YRTPIVAGTT TLMLMYAPSN VAGRAPAASA QGALLQWYNG TTYLAASYNQ VWGVNGASTV RNDLYGLGAV YDTGRLVLSA SFNQYAPKLA GDGIARVYTL GTIVPFGVNA VRASIVYRDT SGVRDAAGRP AKDSALGVML GYDYLLSKRT GLYARTGFIR NYGMSTVLLN GNPLPTEPGG TTPRTGMTPV TMSLGMYHNF
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