| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3564 |
|---|
| Symbol | |
|---|
| ID | 4094677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | - |
|---|
| Start bp | 688755 |
|---|
| End bp | 689549 |
|---|
| Gene Length | 795 bp |
|---|
| Protein Length | 264 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | 638016863 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_623431 |
|---|
| Protein GI | 107025920 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.682974 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCACCGTG TCACCCACTA TCGACGCACC GGCGAAGGCA TCGAAGCGAT CAGCCTCGAA
TCCGACCGCG CGTTTCCGCG CCACGCGCAC GACGAATTCG GGGTGGGCGT GATCGTCAGC
GGTGCGCACC GGTCGTGGAG CGGTCGCGGG CAGGTCGACG CGCTGGCGGG TGACGCGATC
ATGGTCAATC CCGGCGAGAT GCACGACGGC TCGCCGCTCG AGGCCGGCAC CGGCAGGCGC
TGGCGGATGC TGTACCTCGC GCCCGGGCTG GTCGCGGGCG TCGCCGCGGA AGAAGGCCTC
GGCGGCGTCG AGCTTGCCCA TCCGGCCGTG CGCGACGCGC GGCTCACGGC CGCCGTCGGT
CGGCTGCATG CGCGCATCGT CGCAGGCGAA ACCCCGCCGC TGGCCCGCGA CGAAGCGCTC
GTGATGCTCG TCGCCGGTTT GCTCGCCCGG CACGCGAACC GCACGCTGCC GGCGGCCGGC
GTCGCGCCGG CCGTCCGCGT CGCGCGGGAG CGGCTCGATG CAGCGCCGGC TGCTCCCGTG
TCGCTCGCCG AGCTGGCCGA CCTGAGCGGC GTCAGCCGCT TCCAGTTGCT GCGCGGCTTT
GCGCGCGAGC TCGGCATCAC GCCGCACGCC TATCTGGTTC AGTCGCGCAC GCGGCTGGCG
CGCGCGCTCC TGGCCAGCGG CCTGCCGATC GCCGATGCCG CGGCCGAAGC CGGCTTCGCC
GATCAGAGCC ACCTGACGCG TGCGTTCGCA CGCCAGTTCG GGATCACGCC GGGGCGGTTC
ACGCAGGCAG GATAA
|
|---|
| Protein sequence | MHRVTHYRRT GEGIEAISLE SDRAFPRHAH DEFGVGVIVS GAHRSWSGRG QVDALAGDAI
MVNPGEMHDG SPLEAGTGRR WRMLYLAPGL VAGVAAEEGL GGVELAHPAV RDARLTAAVG
RLHARIVAGE TPPLARDEAL VMLVAGLLAR HANRTLPAAG VAPAVRVARE RLDAAPAAPV
SLAELADLSG VSRFQLLRGF ARELGITPHA YLVQSRTRLA RALLASGLPI ADAAAEAGFA
DQSHLTRAFA RQFGITPGRF TQAG
|
|---|
| |