| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3518 |
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| Symbol | |
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| ID | 4096325 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008061 |
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| Strand | + |
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| Start bp | 629410 |
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| End bp | 630039 |
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| Gene Length | 630 bp |
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| Protein Length | 209 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638016817 |
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| Product | Type III secretion system HrpE/YscL |
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| Protein accession | YP_623385 |
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| Protein GI | 107025874 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02499] type III secretion apparatus protein, HrpE/YscL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00253777 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGACTGG CTTTTCTGAT CACGAGCGAC AACCTGCAGC TACTGTCGGA ACGCAAGGTG
CTCAAGGAGC GCGAATACGC GGCGCTGCTC GACGCGTCCG CGGTGATCGC GACCGCGCAT
GAAGAGGCGG CGCGCATCGT CGCCGACGCG CAGCGCGAGT TCGACAAGCG CCAGGCGGCC
GGCTACGACG AAGGCATGCG CCGCGCGCAA CGCGAGCAGG CCGCGCAGGC CTACACGCAG
GCGCTCGCCG CCACGCGCAC GATGGAAACG ATGAAGGACG CGATGGCCGA TATCGTCGTG
AAGGCCGTGC GCGCGATCGT CGGCGAGATG AGCACGCAGA AGCTGTACGA GGCCGCGCTC
GCGCGGATCG CGCCGCTCGT ACGTGACGAG GCGTTCCTGA TCGTGCGTAT CGCGCCCGGC
CGCAAGGACG AGATGCGCGA CGCGCTCGAC GGCGCGTTCG CCGGGCAGTC GAACCGGCAG
AAGATCCGCA TCGTCGAGGA CGCGCAGCTC GAACGCCATG CATGCACGGT CGAGACGCCG
TCCGGGCGCA TCGACGCGAG CCTCGACCTG CAGATCGACG CGTTGCGTCA GGCGATCCGC
CGCGACGCGC TGAAGGGCGC CGCGCGATGA
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| Protein sequence | MGLAFLITSD NLQLLSERKV LKEREYAALL DASAVIATAH EEAARIVADA QREFDKRQAA
GYDEGMRRAQ REQAAQAYTQ ALAATRTMET MKDAMADIVV KAVRAIVGEM STQKLYEAAL
ARIAPLVRDE AFLIVRIAPG RKDEMRDALD GAFAGQSNRQ KIRIVEDAQL ERHACTVETP
SGRIDASLDL QIDALRQAIR RDALKGAAR
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