Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3415 |
Symbol | |
ID | 4094184 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 520076 |
End bp | 521269 |
Gene Length | 1194 bp |
Protein Length | 397 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638016715 |
Product | secretion protein HlyD |
Protein accession | YP_623283 |
Protein GI | 107025772 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.89814 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCAGA AGACCCATCG CCGCCGGCGC ATCGTGCTGG CTACCCTTGC CGTCGTCGCG ATCGCCGTCG GCATCACGCT GAAGGCCTGC GCGCCGACCA AGCATCCGCA ATACCTTTCC GCGCCGGTCA CGCGCGGCGA TCTCGAGAAC GCGGTGCTCG CGACCGGCGC GCTGCAGGCG TTCAGGCAGG TTGACGTCGG CGCGCAGGTG TCGGGGCAAT TGAAGACGCT GAAGGTCAAG CTCGGCGACA AGGTCACGAA GGGCCAGTGG CTCGCCGAGA TCGACCCGGT GATCTCGGAA AACGCACTGC GCCAGGCGCG CGCCAGCGAA GAAAGCCTGC GCGCGCAGCA ACGATCGACC GCCGCACAGT TGACGCAAGC CGAACTCGCG TTCCGCCGCC AGCAGGCGAT GCTGCCCGAC GATGCGACGT CGCGCGAATC GTTCGAAGCC GCGAAGGCGA CGCTCGACGT GCAGCGCGCG ACCCTCGCGT CGCTCGCCGC GCAGATCCGT TCGGCCCGCA TCCAGATCGA GACCGCACAA GCCAACCTCG GCTACACGCG CATCGTCGCG CCGATCGACG GCGAGGTCGT CGCGATCGTC ACGCAGGAAG GCCAGACCGT GATCGCGCAG CAGCAGGCGC CGGTGATCCT GAAGCTCGCG AATCTCGACA CGATGACCGT GAAGGCGCAG GTGTCGGAAG CGGACGTGAT CCGCGTGAGC GCCGGCCAGA CCGCTTATTT CACGATTCTC GGCGAACCGG ACAAGCGTCA CTACGGCAAG CTGCGCGCGA TCGAACCGGC ACCGCAGAAC TACGCCGACG CGCAAAGCGC GCTCGGCGGA GGGGCCGGCG GCGGCGCGAA GCCGAACGCC GCGGTGTTCT ACAACGCGCT GTTCGACGTG CCGAATCCCG AGCACCGGCT GCGCATCGCG ATGACCGCGC AGGTCAACAT CGTGCTCGGC AACGCGCGCA ACGCGCTCAG CATCCCGGCC GCCGCGCTCG GCGAGAAGCG CAAGGACGGC ACCGTCGCGG TACGCGTGCT GCGCGCCGAC GGCAGCACGG AAACGCGCCA CGTCCGCATC GGCATCAACA ACAACGTGCG CGTCGAAGTA CTGGCCGGCC TGAAGGACGG CGAGCGTGTC GTGATCGGCG AAGCGTCGGC GGACGAGCGC GCGCCGCTGT CGGACGTGGT GTAA
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Protein sequence | MTQKTHRRRR IVLATLAVVA IAVGITLKAC APTKHPQYLS APVTRGDLEN AVLATGALQA FRQVDVGAQV SGQLKTLKVK LGDKVTKGQW LAEIDPVISE NALRQARASE ESLRAQQRST AAQLTQAELA FRRQQAMLPD DATSRESFEA AKATLDVQRA TLASLAAQIR SARIQIETAQ ANLGYTRIVA PIDGEVVAIV TQEGQTVIAQ QQAPVILKLA NLDTMTVKAQ VSEADVIRVS AGQTAYFTIL GEPDKRHYGK LRAIEPAPQN YADAQSALGG GAGGGAKPNA AVFYNALFDV PNPEHRLRIA MTAQVNIVLG NARNALSIPA AALGEKRKDG TVAVRVLRAD GSTETRHVRI GINNNVRVEV LAGLKDGERV VIGEASADER APLSDVV
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