Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3344 |
Symbol | |
ID | 4093957 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 433352 |
End bp | 437836 |
Gene Length | 4485 bp |
Protein Length | 1494 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638016643 |
Product | PAAR |
Protein accession | YP_623212 |
Protein GI | 107025701 |
COG category | [M] Cell wall/membrane/envelope biogenesis [S] Function unknown |
COG ID | [COG3209] Rhs family protein [COG4104] Uncharacterized conserved protein |
TIGRFAM ID | [TIGR01643] YD repeat (two copies) |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.0030504 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGACA CGCCGAACTA CAACGAGCCG AGCGGCAGCG CCCAGGAGCG TCTCGATCAG ATCGCCGGGC TGGAGGACGG TGAAGCCGCG AAAGCGGCCG AGCAGCCGTT TTACGAGCAC CTCAACTACG GGATGCTCGG CGCCGATGCG GGCCTGACCG CCGTCGAGGG GACGGCCGCC GGGCTGGGTG CCGCCGGTAC GGCGCTCGCG GGTGGGGCGA CCGGCGGGGC GGCACTGGGC GCGGGCGCGA TTGCGGCGGG CACCGTCATG CTTCCGCTGG CGATTGCGGT CGGCGGTGCG TGGGCGCTCG ACAAGGTTGG CGTGACCGGC TGGCTATCGA AGGAATTCAC GCAGGTTGGC GACGCGCTCG GCCTCACGAT CGGTCGCGGC GATCCGCACC CCGCCTGCAT TGGCGATCGG ATCGCGCACT CGTCGGGTTT TATGGGGATT CTCGCCGGCA TTGCCGTGGG AGTCGCGATT GGCGTGGCAG TGGCGGCGAC CGTGGCAACC GGTGGACTCG CCGGCGCGCT GATCGTCGGC GCGTGCATGG CGGGCGGCCT GACGCTGGGG AGTGCGCTCG CGTCGGCGAG CCAGAGCATG GGCAGCAACT GTGGCGAGAT CGTCACCGGT TCGAGCAACG TGTACTTCGA AGGCAAGAAG GTGGCGCGTG TCACGGACCT GGTGAAATGC GATCACCATT CCGGCGTGCC GCAGGCACTC GTCGACGGCA GCAAGACCGT GTTCGTCAAC GGTCTGCCGC TGGTGCGGAT CGGCCACGAA ACGCACTGTA GCGGCAAGGT CAATTCGGGG CGCAACAGCA TCTGGATCGA CAAGACGACT GGACACTACG GTCCGAAGAA CCCGGAGTTG TCCGCGACTC AGGAATTCCT GGCGGGTTTG CTCGGCGGGA TCGTAGGAGG CGGAGTCGGA AAATTTGCCG GCAAGGGGCT GCGGGGGTTG CGCGAAAAAT TCAAGCCTGA GCCCACCCGA TCCGCGGAAC AGAAGGGCAT CAAGGACGAG AACCGGCCGA CGTGCAAGGA CCCGGTTGAT CCGGTGTCCG GCGAAATGCT CGAGATCCGT ACGGATCTCG TCATTCCCGG CATCCTGCCT CTCGAGTTCA AGCGACGCTA TCGGACTCGA TCGGACGACC ATGGATTGCT CGGTCACCGC TGGTCGGACA ACTGGTCGCA ACAACTGACG TTCGATGGCG GCCGCTTCGT GAGATTCCAC GACGGCGCCG GCCTGGTGAT CGGCTTTGAC GCGCCGGATA TGGCGCTCAA CGGCATCAAC CTGCGCGAGC CGCGCTATCG GCTGGTCGGA AGCCGGCTCG AACCGCGCAT CTTCGATCGC GATACGCGGC AACTACGTAT TTTCGCGCCG CTCGTCGATG GGCGTTCGTC TCGCCTCGAA CGGATCGAGG ACCTCGACGG TAACGCAATC GTTCTCTCGT ACGATATTGC CGGCCGTTTG AGTGGTATGG CCCATAGCGA CGGCTATCGG CTCGAGATTG TTTGTCACGG GCGCGACCGA CGGCTGGAAC GGATCGTTCT TCACGATGCG GACGGCGGTT CCCGGACACT CGTGGACTAC GACTACCAGA ACAGCATGCT TACCCACGTG GCGAGCTTCC AGTTTGGCCA GTTCTACTAC GCGTATGACG AACACGGCTG GATGACCCAG TGGCGGGATA CGGACCAGAC CGACGTTCGA TATCGGTACG ACACCGCTGG TCGTGTCGTC GAGACCGGCA CGCAGCAGGG TTATCACACA GGTCGGTTCA TCTACGAGGC CGGTCGCACA CGGGTGATCG ATGTCGACGG AGAATGGACC TATGACTATA ACGATGAAGG TCTCGTAACG GCCGAAACCG ATCCGCTCGG CCATTGCACT CGCTCCGAAT GGGAGCTTGG TCGCTTGATG GCCCGGATCG ATCCGCTGGG TCGACGGACG GACTATCGAT ACGACGAGCG TGGTCAACTG ACTTCGGTCG TCGAAAGCTC GGGGAGGATG GTCGAGTTCG ACTATGACGA CGAGCAGCGC CTTACCGGCA CGCGTTTGCC GAACGGCGGC CGGATCAGGC TCGAGTATGA CCATCTGTAT CGATTGATTG CTCGCACCGA GCCGGACGGC AACAGAACTG CCTATCGCTA CGGCCCCCGA GGCGAACTGC TGCGGGTGGT TCAGGGTGAT CGCGAGACGC GCCTGGACTA CGATGACCGG TTGCGGCTGA CCGACATCGA GTTGCCGACA GGTGCGCGCT TCAGGCGCAG GATAGACGTA CTGGGTCGGC TGCTGGAGGA GACGTCGCCC GATGGGCACG TGACGCGTTA CGACTATGCT GACGGCCCGG CAAATCCGCG CGGTCTGCTG AGCGCGATCA CGCGCCCCGA TGGCTCGGTG TCGAGGGCGC GATATAACAG CGAGAGCCTG CCCGTCGAGT GGATCGATCC GCTCGGACGT ACGATCCGGC GAACCTATGG CCCGTTCGAT TTGCTTACGG CGTCGATCGA CGCGGCCGGT CATGCAACGC GTTTCGAGTA CGACCATGCC ACCCGGCTGA CGAAGGTCAT CAATGCTCTG GGAGAGACTT ACACGTACCG CTACGACGCG GCCGGGCGTC TCGCGGCCGA GATCGACTGG GGCGGCCGCG CGACTCGATA TGAGCGCGAT GCCGTCGGCC GCCTGCTGGC GAAGACACTG CCCGACGGTG GCCAGTGGCG CTATACGTAC GATGCATCCG ACCGGCTCGT CGAGATCGAT GCCGGCGACG TGAAGCTTGC TTACCGCTAC GATGCGAGCG GACGACTGGC GTCGGCGGAG GTCCAGGGCG AGCACGTTCA CGTGACGCGC TTTGCCTACG ACAGGAATGG CCGCTTGATC GGAGAAGATC AGCATGGCGA ACTGTTGAGG CACGTCTACG ACGCGGACGG CCAGCGGAGC CTTCGGCTGA CGCCTCGGCG GGAGACGGCC TATGCCTATG ATGCATTGGG TGCGCTCACG CAGGTCGCCG GGCTGACGAT CCGGCGCGAT GGCTTAGGGC GCGAGATCGG GCGGCAGGCG GGAGATTTTG TCGCGCAGCA ACAGTACGAT GCGCTCGGCC GTATACGCCG GCAGATTGCA GGGCCTGCCG TAGCCTTCGA TGCGTTGCAA GCCGATCCGG CCCGGGCGCT CGAGCAATTG ACGCGGCAGG TCTATCACTA CGACGCAGCC GGACAACTGG AGCGAGTGGA CACCGGCGCG GATACGCTCA CCTACCAGCG CGATGAGCGC GGCCAGATCA TCTCCGCAGA AAGTCTGCTG CAGCCAAGCG AGCACTTCCG CTATGACGCT GTGATGAACA TTGCCGCGCA CGGGCAACGG GCACCTGTGG ATGCCCACCA CTATCGCCGC GGAGGTCTGC CGGAACAGGT TGGCTACGCA CGCTATCAAT ACGATGCACG TGGCCGCACG ATCGAGAAGA CGGTCGAACA GCCGGGGTTC AGGCCGAAAA CGTGGCAATA CACGTGGGAT GGCCTCAATC GGCTCGTGAA GGTCGTTACG CCCGAGCGCG GTGTTTGGGC GTATCGCTAT GACGCTTTCA ATCGCCGGAT CGAGAAGCAG CAAGTCGGCG GCCGTGAAAC GGTGAGGTTC CTGTGGGACG GTCCGATGCT TGCCGAGCGC TGGATCGAGC AGCGGGATGG TACGACGGGC CAAGTCGTGA CCTGGCATAT CGAGCCGGGC AGTTTCTCGC CGCTCGCGCA GGAGACCGAC AGCGGTATCT TTTCAATTCT GACGGACCAG GTCGGTTTGC CAAAGGCGGC GTTCGACGAA CATGGCACGA CTGTGTGGAA GGGGGCGTAC TCGCTGTGGG GGAAACCGCT GCCGGCCAGA CGAGCAGCGA ACGATGCGCA GGGCGCGGCA ATTTCAATCG ATACGACGTT GCGTTTTCCC GGTCAATGGG CCGACGACGA GACGGGACTG TGCTACAACC TGAATCGATA CTACGATCCA GATTCAGGGC AGTATCTTAG TTGCGATCCG ATTGGCCTTG AAGGTGGATT TAGAACGCAA GGCTATGTGC ACGCGCCAGA CGCGTGGGTT GATCCGCTGG GATTGAGCGG CTGCGAGGAC GTTAAAGAGT ACGATGTTGT TCCATATCGA CCAAGCAATT CGCCTTTAGA AAACCACCAT GGAGTACTCG ATGTATGGAT GGCCAAGAAT GTTCCAGATT ACGGTGGGAA ATATCCGATT AAATCGCCAA CAATTGCTTT GTCCGCTGAG TCGCATGCTG CGACAAAGGC TGCGTACCGA GATTGGTTGA CTATGAAAAC CGGGCGCCCA GTTGGTGGAA AAGTTGATTG GGAAGCCGTA AGCAATCGAG AAATGCAGGC GCTGTCCGAG CAAATGTTTG ATGCTGCAAA AGTTCCGCAG GCGAGCAGGG ATGCGTACTA CAGGGCGTTG AATCAGTATT TGTACACGGG TGAGTTTGAT CCGGTGAAAT TTTAG
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Protein sequence | MSDTPNYNEP SGSAQERLDQ IAGLEDGEAA KAAEQPFYEH LNYGMLGADA GLTAVEGTAA GLGAAGTALA GGATGGAALG AGAIAAGTVM LPLAIAVGGA WALDKVGVTG WLSKEFTQVG DALGLTIGRG DPHPACIGDR IAHSSGFMGI LAGIAVGVAI GVAVAATVAT GGLAGALIVG ACMAGGLTLG SALASASQSM GSNCGEIVTG SSNVYFEGKK VARVTDLVKC DHHSGVPQAL VDGSKTVFVN GLPLVRIGHE THCSGKVNSG RNSIWIDKTT GHYGPKNPEL SATQEFLAGL LGGIVGGGVG KFAGKGLRGL REKFKPEPTR SAEQKGIKDE NRPTCKDPVD PVSGEMLEIR TDLVIPGILP LEFKRRYRTR SDDHGLLGHR WSDNWSQQLT FDGGRFVRFH DGAGLVIGFD APDMALNGIN LREPRYRLVG SRLEPRIFDR DTRQLRIFAP LVDGRSSRLE RIEDLDGNAI VLSYDIAGRL SGMAHSDGYR LEIVCHGRDR RLERIVLHDA DGGSRTLVDY DYQNSMLTHV ASFQFGQFYY AYDEHGWMTQ WRDTDQTDVR YRYDTAGRVV ETGTQQGYHT GRFIYEAGRT RVIDVDGEWT YDYNDEGLVT AETDPLGHCT RSEWELGRLM ARIDPLGRRT DYRYDERGQL TSVVESSGRM VEFDYDDEQR LTGTRLPNGG RIRLEYDHLY RLIARTEPDG NRTAYRYGPR GELLRVVQGD RETRLDYDDR LRLTDIELPT GARFRRRIDV LGRLLEETSP DGHVTRYDYA DGPANPRGLL SAITRPDGSV SRARYNSESL PVEWIDPLGR TIRRTYGPFD LLTASIDAAG HATRFEYDHA TRLTKVINAL GETYTYRYDA AGRLAAEIDW GGRATRYERD AVGRLLAKTL PDGGQWRYTY DASDRLVEID AGDVKLAYRY DASGRLASAE VQGEHVHVTR FAYDRNGRLI GEDQHGELLR HVYDADGQRS LRLTPRRETA YAYDALGALT QVAGLTIRRD GLGREIGRQA GDFVAQQQYD ALGRIRRQIA GPAVAFDALQ ADPARALEQL TRQVYHYDAA GQLERVDTGA DTLTYQRDER GQIISAESLL QPSEHFRYDA VMNIAAHGQR APVDAHHYRR GGLPEQVGYA RYQYDARGRT IEKTVEQPGF RPKTWQYTWD GLNRLVKVVT PERGVWAYRY DAFNRRIEKQ QVGGRETVRF LWDGPMLAER WIEQRDGTTG QVVTWHIEPG SFSPLAQETD SGIFSILTDQ VGLPKAAFDE HGTTVWKGAY SLWGKPLPAR RAANDAQGAA ISIDTTLRFP GQWADDETGL CYNLNRYYDP DSGQYLSCDP IGLEGGFRTQ GYVHAPDAWV DPLGLSGCED VKEYDVVPYR PSNSPLENHH GVLDVWMAKN VPDYGGKYPI KSPTIALSAE SHAATKAAYR DWLTMKTGRP VGGKVDWEAV SNREMQALSE QMFDAAKVPQ ASRDAYYRAL NQYLYTGEFD PVKF
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