Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3231 |
Symbol | |
ID | 4095451 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | - |
Start bp | 295534 |
End bp | 296802 |
Gene Length | 1269 bp |
Protein Length | 422 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638016530 |
Product | LolC/E family lipoprotein releasing system, transmembrane protein |
Protein accession | YP_623099 |
Protein GI | 107025588 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
TIGRFAM ID | [TIGR02212] lipoprotein releasing system, transmembrane protein, LolC/E family |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.113164 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGAA ACCGCTTGAA ACTCCCGTTC GAATGGCAGA TCGGGCTGCG CTACGCGCGC GGCGGCCGGC GCTCGGCCGG CGACGGCTTC GTGTCGTTCA TCGCCGGCGC CGCGATGGCC GGCATCGCGC TCGGCGTGGC CGCGCTGATC GTCGTGCTGT CGGTGATGAA CGGCTTTCGC ACCGAGGTGC GCGACCGGAT GCTGTCGGTG CTCGCGCACG TGGAAATCTT CTCGCCGTCC GGCGCGATGC CCGACTGGCG GCTGACCGCG CACGAATCGT TACAGAATGC GGCGGTGCGT GCCGTCGCGC CCTATGTCGA CGCACAGGCG CTGCTGACGA ACGCGGGCAA TGTGACGGGC GTCGCGTTGC GCGGCATCGA TCCCGTGCTC GAGCCGCGCG TGTCCGAGAT CGCGCGCAAG CTGAAGACCG GACGCCTCGA CGCGCTCGTG CCGGGCGAGA TGGGCATCGT GCTCGGCGCC GCGCTCGCCG ATACGCTGCA CGTGAAGATC GGCGACCGCA TCACGTTCTT CGCGCCCGGC AACACCGCGC GCTTGGGCGA CGCGCTGCCG CGGTTCCGCC AGTTCAACGT GGTCGGTACG TTCGAGTCGG GCCACTACCA GTACGACAGC GCGCTCGCGT ACATCCATAT CCGCGACGCA CAGCAACTGT CCAACGTGAA CGCGCCGACC GGCATCCGGC TGCGCATCGA CGATCTGCAG CGCGCGCCGG AAATCGCGCT GGCGCTGTCG CGCACGCTGT CGGGCAATCT GTACCTGCGC GACTGGACGC GGCAGAACCG CACGTGGTTC GAAGCCGAGC GGCTGCAGAA ACGGATGCTG TCGCTGATCC TGATGCTGAT CGTCGCGGTC GCCGCGTTCA ACCTCGTGTC GTCGCTCGTG ATGACGGTCA CGCAGAAGCA GGGCGACATC GCGATCCTGC GCACGCTCGG CGCGCCGCCC CGCTCGATCA TGAAGATCTT CGCGATCCAG GGGATGACGA TCGGCCTCGC CGGCACGCTG GCGGGCGTTG CGCTCGGCTG CGCGATCGCG GTGAGCATCC CGGTGGTGCT GCCGGCGGTC GAGCAGTTGC TCGGCATCCG CTTCCTGACG CCGTCCGTGT ATTTCCTCAG CGCACTGCCG TCGAAGCTGT CGGCGCTCGA CGTGATCGAG ATCGCGTCGG CCGCGTTCCT GATGTCGTGC GTCGCGACGC TGTACCCGAG CTGGCGCGCC GCGCGGGTGC GCCCGGCCGA GGCGCTGCGC GACGAGTAG
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Protein sequence | MKGNRLKLPF EWQIGLRYAR GGRRSAGDGF VSFIAGAAMA GIALGVAALI VVLSVMNGFR TEVRDRMLSV LAHVEIFSPS GAMPDWRLTA HESLQNAAVR AVAPYVDAQA LLTNAGNVTG VALRGIDPVL EPRVSEIARK LKTGRLDALV PGEMGIVLGA ALADTLHVKI GDRITFFAPG NTARLGDALP RFRQFNVVGT FESGHYQYDS ALAYIHIRDA QQLSNVNAPT GIRLRIDDLQ RAPEIALALS RTLSGNLYLR DWTRQNRTWF EAERLQKRML SLILMLIVAV AAFNLVSSLV MTVTQKQGDI AILRTLGAPP RSIMKIFAIQ GMTIGLAGTL AGVALGCAIA VSIPVVLPAV EQLLGIRFLT PSVYFLSALP SKLSALDVIE IASAAFLMSC VATLYPSWRA ARVRPAEALR DE
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