Gene Bcen_3218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3218 
Symbol 
ID4095438 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp281173 
End bp284184 
Gene Length3012 bp 
Protein Length1003 aa 
Translation table11 
GC content67% 
IMG OID638016517 
Productsarcosine oxidase alpha subunit family protein 
Protein accessionYP_623086 
Protein GI107025575 
COG category[E] Amino acid transport and metabolism
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0404] Glycine cleavage system T protein (aminomethyltransferase)
[COG0492] Thioredoxin reductase 
TIGRFAM ID[TIGR01372] sarcosine oxidase, alpha subunit family, heterotetrameric form 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.6611 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGA AAGACCGCCT CGGCACCGGT GGCCGCATCA ATCGCGCGAT TCCGCTGACG 
TTCACGTTCA ACGGCCGCAC GTACCAGGGC TTCCAGGGCG ACACGCTCGC GTCCGCGCTG
CTCGCGAACG GCGTGCATTT CGTCGCGCGC AGCTTCAAGT ACCACCGTCC GCGCGGGATC
GTGACGGCGG ATGTGGCGGA ACCGAATGCC GTCGTGCAGC TCGAAACCGG CCCGTACACG
GTGCCGAACG CGCGCGCGAC CGAGATCGAG CTGTATCAGG GGCTTGTCGC GACGAGCGTG
AACGCCGAGC CGACGCTCGA GAACGACAAG TACGCGATCA ACCAGAAGCT CTCGCGCTTC
ATGCCGGCCG GGTTCTACTA CAAGACCTTC ATGTGGCCGC GCAACATGTG GCCGAAGTAC
GAAGAGAAGA TCCGTGAAGC GGCCGGCCTC GGCAAGGCGC CCGAAGTGCT CGACGCCGAT
CGCTACGACA AGTGCTACGC GCACTGCGAC GTGCTCGTGG TCGGCGGTGG CCCGTCGGGC
CTCGCCGCCG CGCATGCGGC AGCGACGGCC GGCGCGCGCG TGATCCTCGT CGACGACCAG
CGCGAACTCG GCGGCAGCCT GCTGTCGTGC CGCGCGGAGA TCGACGCGAA GCCCGCGTTG
CAGTGGGTCG AGAAGATCGA AGCTGAACTG CGCAAGCTGC CCGACGTGAC GATCCTGTCG
CGCAGCACCG CGTTCGGCTA CCAGGACCAC AACCTCGTGA CGGTCACGCA GCGCCTGACC
GATCACCTGC CGGTGTCGAT GCGCAAGGGC ACGCGCGAAC TGCTGTGGAA GGTCCGTGCG
AAGCGCGTGA TCCTCGCGAC CGGCGCGCAC GAACGGCCGA TCGTGTTCGG CAACAACGAC
CTGCCGGGCG TGATGCTGGC GGGCGCGGTG TCCACCTACG TGCATCGCTT CGGCGTGCTG
CCGGGCCGCA ACGTGGTCGT GTTCACGAAC AACGATCGTG CATACCAGAC CGCGCTCGAC
CTGAAGGCGT GCGGCGCGAA GGTGACGGTC GTCGATTCCC GCGCATCGTC GAACGGCGCG
CTGCCGGCCG CTGCGAAGCG GCAGGGCGTG ACGGTGATGA GCGGTGCGGT CGTCACGGCC
GCTTCGGGCA AGTGGCGCGT ATCGTCGGTC GACGTCGCGT CCTACTCGAA CGGCCAGACC
GGCGGCAAGC TGCAGACGCT GCCGTGCGAC CTCGTCGCGA TGTCGGGCGG CTTCAGCCCG
GTGCTGCACC TGTTCGCGCA GTCGGGCGGC AAGGCGTGCT GGAACGACGA GAAGGCGTGT
TTCCTGCCGG GCAAGCCGGT GCAGGCGGAA GCGAGCATCG GTGCGGCGGC CGGCGAATTC
GGGCTGGCTC GTGCGCTGCG GCTCGCGGTC GATGCGGGCG TGGAAGCGGC GAAGGCCGCG
GGCTTCACGG CCGCGCAGCG TCCGGCCGCA CCGCAGGTCG CCGAAGCCGT CGAAGGTGCG
CTGCAGCCAT TGTGGCTCGT CGGCAGCCGC GAGGCCGCGG CACGTGGACC GAAGCAGTTC
GTCGATTTCC AGAACGACGT CGCGGCGGCC GACATCCTGC TCGCCGCGCG TGAAGGCTTC
GAGTCGGTCG AGCACGTGAA GCGCTACACG GCGATGGGTT TCGGCACCGA CCAGGGCAAG
CTCGGCAACA TCAACGGGAT GGCGATCCTC GCGGGCGCGC TCGGCAAGAC GATTCCGGAA
ACGGGCACGA CGACGTTCCG CCCGAACTAC ACGCCCGTGT CGTTCGGCAC GTTCGCGGGC
CGCGAGACGG GCGACTTCCT CGACCCGATC CGCAAGACGG CCGTGCACGA ATGGCACGTC
GAGCACGGCG CGATGTTCGA GGACGTCGGC AACTGGAAGC GGCCGTGGTA CTTCCCGAAG
AACGGCGAGG ATCTGCATGC GGCCGTGAAG CGCGAATGCC TCGCGGTGCG CAACGGCGTC
GGCATTCTCG ACGCGTCGAC GCTCGGCAAG ATCGACATCC AGGGCCCGGA CGCGGTGAAG
CTGCTGAACT GGATGTACAC GAACCCGTGG AACAAGCTCG AAGTGGGCAA GTGCCGCTAC
GGGCTGATGC TCGACGAAAA CGGGATGGTG TTCGACGACG GCGTGACCGT GCGCCTCGCC
GACCAGCATT TCATGATGAC GACCACCACC GGCGGCGCGG CGCGCGTGCT GACGTGGCTC
GAGCGCTGGC TGCAGACCGA ATGGCCCGAC ATGAAGGTGC GGCTCGCGTC CGTCACCGAT
CACTGGGCGA CGTTCGCGGT GGTCGGCCCG AAGAGCCGCA AGGTCGTGCA GAAGGTGTGC
CAGGACATCG ACTTCGGCAA TGAAGCGTTC CCGTTCATGA GCTACCGCAA CGGCACGGTT
GCCGGCGCGA AGGCGCGCGT GATGCGGATC AGCTTCTCGG GCGAGCTGGC CTACGAAGTG
AACGTGCCGG CGAATGCGGG CCGCGCGGTG TGGGAAGCGC TGATGGCGGC CGGCGCCGAG
TTCGACATCA CGCCGTACGG CACCGAGACG ATGCACGTGC TGCGCGCGGA GAAGGGCTAC
ATCATCGTCG GCCAGGACAC CGACGGCTCG ATCACGCCGT TCGATCTCGG GATGGGCGGC
GTCGTCGCGA AGTCGAAGGA CTTTCTCGGC AAGCGTTCGC TGTCGCGTTC GGATACCGCG
AAGGAAGGCC GCAAGCAGTT CGTCGGCCTG CTGACCGAAG ACGAACAGTT CGTGCTGCCG
GAAGGCGCGC AGATCATCGC GAAGGACACG CAGGTGTCGG CCACCGATCC GACGCCGATG
ATCGGCCACG TGACGTCGAG CTACTACAGC CCGATCCTGA AGCGCTCGAT CGCGCTCGCG
GTGGTGAAGG GCGGCCTGAA CAAGATGGGC GAGAGCGTCG TGATTCCGCT GGCCAACGGC
CGGCGCATCA CCGCGAAGAT CTCCAGCCCG GTTTTCTACG ATACCGAAGG GGTGCGTCAG
CATGTGGAAT GA
 
Protein sequence
MSQKDRLGTG GRINRAIPLT FTFNGRTYQG FQGDTLASAL LANGVHFVAR SFKYHRPRGI 
VTADVAEPNA VVQLETGPYT VPNARATEIE LYQGLVATSV NAEPTLENDK YAINQKLSRF
MPAGFYYKTF MWPRNMWPKY EEKIREAAGL GKAPEVLDAD RYDKCYAHCD VLVVGGGPSG
LAAAHAAATA GARVILVDDQ RELGGSLLSC RAEIDAKPAL QWVEKIEAEL RKLPDVTILS
RSTAFGYQDH NLVTVTQRLT DHLPVSMRKG TRELLWKVRA KRVILATGAH ERPIVFGNND
LPGVMLAGAV STYVHRFGVL PGRNVVVFTN NDRAYQTALD LKACGAKVTV VDSRASSNGA
LPAAAKRQGV TVMSGAVVTA ASGKWRVSSV DVASYSNGQT GGKLQTLPCD LVAMSGGFSP
VLHLFAQSGG KACWNDEKAC FLPGKPVQAE ASIGAAAGEF GLARALRLAV DAGVEAAKAA
GFTAAQRPAA PQVAEAVEGA LQPLWLVGSR EAAARGPKQF VDFQNDVAAA DILLAAREGF
ESVEHVKRYT AMGFGTDQGK LGNINGMAIL AGALGKTIPE TGTTTFRPNY TPVSFGTFAG
RETGDFLDPI RKTAVHEWHV EHGAMFEDVG NWKRPWYFPK NGEDLHAAVK RECLAVRNGV
GILDASTLGK IDIQGPDAVK LLNWMYTNPW NKLEVGKCRY GLMLDENGMV FDDGVTVRLA
DQHFMMTTTT GGAARVLTWL ERWLQTEWPD MKVRLASVTD HWATFAVVGP KSRKVVQKVC
QDIDFGNEAF PFMSYRNGTV AGAKARVMRI SFSGELAYEV NVPANAGRAV WEALMAAGAE
FDITPYGTET MHVLRAEKGY IIVGQDTDGS ITPFDLGMGG VVAKSKDFLG KRSLSRSDTA
KEGRKQFVGL LTEDEQFVLP EGAQIIAKDT QVSATDPTPM IGHVTSSYYS PILKRSIALA
VVKGGLNKMG ESVVIPLANG RRITAKISSP VFYDTEGVRQ HVE