| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_3162 |
|---|
| Symbol | |
|---|
| ID | 4095363 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 219057 |
|---|
| End bp | 219815 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638016462 |
|---|
| Product | short-chain dehydrogenase/reductase SDR |
|---|
| Protein accession | YP_623031 |
|---|
| Protein GI | 107025520 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3967] Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAGATGA CGGGCAATAC CATTTTCATC ACGGGCGGCA CTTCCGGCAT TGGTCGCGCG
CTGGCCGAGC AGTTTCACGC ACTAGGCAAC AAGGTCATCA TCGCCGGGCG CCGCAAGGCT
CTGCTCGATG AGGTCACGAC AGCCAATCCG GGCATGGAAG GTGTGGCGCT GGACATTTCG
GATGCGGCCG ACATCGACCG CGTCGCAGCG CAGTTGATTC GCGACTATCC GTCGCTGAAC
GTGTTGATCA ACAATGCCGG GATCATGCCG TTTGATGATC CTTCCGGCCG GATCGATGAT
TCCGTCTCCC GCCAAATCCT CGACACGAAT CTGCTGGGTC CGATTCGTCT GACCTCGGCG
TTGATCGAGC ACCTCAAGGC GCAGCCTCGC GCGACGATCA TCCACAACAC CTCGGTGTTG
GCCTATGTGC CGATCGCGAC CAACGCGGTC TATTCAGCCT CGAAGGCGGC GCTGCATTCG
TATGCATTGT CGCAACGCTT CATGCTCAAG GGCACGAGCG TGTCCGTGCA GGAAATCGCG
CCTCCGTGGG TCGACACCGA CCTCATCAAG AAGAGTGGCG ACCCGCGCGC CATGCCGCTC
GATGCATTCA TCGCAGAAAC GATGAAGGGC CTGGCGACCG AAGAGCCCGA AGTCTTTGTC
GAGGCGATTC GCGCGCTGCG CGACAATCCC GGCCTGGGCG AACACGCGCT GATCGATGGC
TTCAACGCCG AGATCGCCGC GAACCCTATC CCGGTCTGA
|
|---|
| Protein sequence | MQMTGNTIFI TGGTSGIGRA LAEQFHALGN KVIIAGRRKA LLDEVTTANP GMEGVALDIS
DAADIDRVAA QLIRDYPSLN VLINNAGIMP FDDPSGRIDD SVSRQILDTN LLGPIRLTSA
LIEHLKAQPR ATIIHNTSVL AYVPIATNAV YSASKAALHS YALSQRFMLK GTSVSVQEIA
PPWVDTDLIK KSGDPRAMPL DAFIAETMKG LATEEPEVFV EAIRALRDNP GLGEHALIDG
FNAEIAANPI PV
|
|---|
| |