Gene Bcen_3104 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3104 
Symbol 
ID4095876 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp141250 
End bp142302 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content71% 
IMG OID638016404 
Producttwin-arginine translocation pathway signal 
Protein accessionYP_622973 
Protein GI107025462 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1957] Inosine-uridine nucleoside N-ribohydrolase 
TIGRFAM ID[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCATC CGATCGCATC CCGCCGCACG TTCCTGAAAC TGTCCGCCGC GCTGGCCGGC 
ACCGCGCTGC TGCCCGAAAC GGGCGCATTC GCGGCTGGCG GCGACGCCGC GCGCCGCACG
GTGATCATCG ATACCGATCC GGGGCAGGAC GACGCCATCG CGATCCTGTT CGCGCTCGGC
GCGCAGGACC GGCTCGACGT GCGCGCGCTG ACGGCCGTGG CCGGCAATGT GCCGCTCGAC
CTCACCGAAC GCAATGCGCG GATCATCCGC GACTGGGCCG GCCGCACGAA CGCGCTGCCG
GTGTATGCGG GCTGCCCGCG ACCGCTCGTG CGCGAGCTCG TGACGGCCGC GAACGTGCAC
GGCAAGACGG GGCTGGAAGG CGTCGAACTG CACGCGCCGC GCGCGCCGCT CGCCGCCGGC
CACGCGGTGT CGTACCTCGT CGATACGCTG AGCCGCGCGG CGCCGAACAG CGTGACGCTG
TGCGCGCTCG GCCCGCTGAC GAACATCGCG ACCGCGCTGG TCGAAGCGCC GCAGATTCGC
GCCGCGCTGC GCGAGATCGT GCTGATGGGC GGTGCGTTCT TCGAGCGCGG CAACATCACG
CCGGCCGCCG AGTTCAACGT CTACGTCGAT CCGCAGGCGG CCGAAGTCGT ATTCGGCAGC
GGCGTGCCGA TCGTCGTGCT GCCGCGCGAC GTCGCGGTGA AGGCGCCGAT CACGCCGGCC
CGCGTCGCGC CGTTCCGTGC GCTCGGCAAC CGCTGCGGCG CGATCGTCGC GGACATCATG
GAGGCCGAGC TCGCCTACAA CAAGAAGCGG CGCGGCGTTG AAGACGCGCC GATGTACGAC
CCGACGGCCG TCGGCTATCT CGTCGATCCG ACGCTGTTCG GCGGCCGCAA GGTGAACGTG
GTGGTCGAGA CGACCGGGCA GTGGACGCTT GGCGAGACCG TCGTCGACTG GAACGGGCGC
AGCGGCCGTG CGGCGAATGC GACATGGATC AACGAGGTCG ATGCGGACCG GTTCTACGCA
GCACTCGTCG AACGGATTGC GAAGCTGCCC TGA
 
Protein sequence
MTHPIASRRT FLKLSAALAG TALLPETGAF AAGGDAARRT VIIDTDPGQD DAIAILFALG 
AQDRLDVRAL TAVAGNVPLD LTERNARIIR DWAGRTNALP VYAGCPRPLV RELVTAANVH
GKTGLEGVEL HAPRAPLAAG HAVSYLVDTL SRAAPNSVTL CALGPLTNIA TALVEAPQIR
AALREIVLMG GAFFERGNIT PAAEFNVYVD PQAAEVVFGS GVPIVVLPRD VAVKAPITPA
RVAPFRALGN RCGAIVADIM EAELAYNKKR RGVEDAPMYD PTAVGYLVDP TLFGGRKVNV
VVETTGQWTL GETVVDWNGR SGRAANATWI NEVDADRFYA ALVERIAKLP