Gene Bcen_3080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_3080 
Symbol 
ID4095989 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008061 
Strand
Start bp108909 
End bp109817 
Gene Length909 bp 
Protein Length302 aa 
Translation table11 
GC content66% 
IMG OID638016380 
ProductLysR family transcriptional regulator 
Protein accessionYP_622949 
Protein GI107025438 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGGAAC GATTCCATCT CGTCGTCATT CGTGAAGTCG AGCGTCAGGG CTCGCTGACC 
GCGGCGGCCA ATGCGCTGCA CCTCACGCAA TCGGCGCTCA GTCACACCGT CCGGAAGATC
GAGCAGCAGC TCGGCACGCC GATCTGGGAT CGCGAAGGCC GCGGCCTGCG GCTCACGCAG
GGCGGGCAAT ATCTGCTGAA GCTGGCGAAC CGGCTGCTGC CGCAGTTCGA GCTCGCCGAG
GAGCGGATGA AGCAGTACGC GAAGGGCGAG CGCGGCACGC TGCGCATCGG GATGGAGTGC
CATCCGTGCT ACCAGTGGCT GCTGAAGGTC GTGTCGCCGT ACCTGTCGCG CTGGCCCGAC
GTCGACGTGG ACGTGAAGCA GCGCTTCCAG TTCGGCGGCA TCGGCGCGCT GTTCGGTTAC
GACATCGACG TGCTCGTGAC GCCCGATCCG CTGAACAAGC CGGGGCTGCG CTTCGATCCC
GTGTTCGACT ACGAACAGGT GCTGGTGGTC GCGGATTCGC ACCGGTTCGC GAACGTCGAC
CACGTGACGC CCGAGCAACT GACCGACGAG GTCCTGATCA CGTACCCGGT CGAAACCGAC
CGGCTCGACA TCTACAACCA GTTCCTGTCG CCGGCCGGCA TCGTGCCGAG GCGGCACAAG
TCGATCGAGA CGACCGACAT CATGTTGCAG ATGGTCGCGA GTGGGCGCGG CGTGGCAGCA
CTGCCGCGGT GGCTCGCCGA CGAGTATGCG GACCGGATGC CGGTCGTGCC GGTCAAGCTC
GGCAAGAAAG GCATCGCGAA GCAGATCTTC CTCGGCATCC GCGAAGCGGA CGCAGCGATC
GACTATCTGG CCGCATTCGT CGCGCTGGCG CGCGAATCGA CGTGGAGCGC GCCGCGCATG
CTGCGCTAG
 
Protein sequence
MLERFHLVVI REVERQGSLT AAANALHLTQ SALSHTVRKI EQQLGTPIWD REGRGLRLTQ 
GGQYLLKLAN RLLPQFELAE ERMKQYAKGE RGTLRIGMEC HPCYQWLLKV VSPYLSRWPD
VDVDVKQRFQ FGGIGALFGY DIDVLVTPDP LNKPGLRFDP VFDYEQVLVV ADSHRFANVD
HVTPEQLTDE VLITYPVETD RLDIYNQFLS PAGIVPRRHK SIETTDIMLQ MVASGRGVAA
LPRWLADEYA DRMPVVPVKL GKKGIAKQIF LGIREADAAI DYLAAFVALA RESTWSAPRM
LR