Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_3064 |
Symbol | |
ID | 4096060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008061 |
Strand | + |
Start bp | 85284 |
End bp | 86138 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 638016359 |
Product | shikimate 5-dehydrogenase |
Protein accession | YP_622933 |
Protein GI | 107025422 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0169] Shikimate 5-dehydrogenase |
TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCGCC CGTCGTTTCT GATCGGCCTG ATCGGCCAGG GCATCGGCGG TTCGCTGTCG CCCGCGATGC ACGAGGAAGA AGGGTTCCGC CAGGGCTTCG GCTACGTGTA CCGGCGCATC GATCTCGATG TGCTCGGCGT GACCGCCGAC GCGCTGCCGC AACTGCTCGA CGCCGCGCAG CGGATGGGCT ACAACGGGCT GAACATCACG CACCCGTGCA AGCAGCGCGT GATCGAGCAC CTCGACGCGC TGTCGGACGA CGCGCGCGCG CTCGGCGCGG TGAACACCGT GCTGTTCAAG GACGGCAAGC GGATCGGTCA CAACACCGAC TGGTCGGGTT TCGCGAAATC GTTCAGCCGC GGGCTGCCCG GCGCGTCGCT CGAACGCGTC GTCCAGCTCG GCGCGGGCGG CGCGGGCGCG GCCGTCGCGC ACGCGGCGCT GCAGATGGGC GCGGCCGAAC TGACGATTTT CGATGTCGAC GGCACGCGTG CCACCGCGCT GGCGGGCGAA TTGCAGCAAC GCTTTCCCGC CGCCCGAGTC ACGCCGGGCA GCGATCTCGC GGCCGCGATG CGCGCCGCGA CCGGCCTGAT CCACTGCACG CCGACCGGCA TGGTCAAGCA TCCGGGCCTG CCGCTGCCGG CCGACCTGCT CCACGCGGGC ATGTGGGTGG CCGACATCGT GTATTTCCCG CTCGAAACCG AACTGATCCA CGCCGCGCGC GCGGCCGGCT GCGCCACGCT GCCGGGCGGC GGGATGGCCG TGTACCAGGC CGTCGACGCG TTCGAGCTCT TCACCGGACG CACGCCCGAC GCCGAGCGGA TGTTCAGTCA CTTTCAGTCG CTCGTCGCGC GCTGA
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Protein sequence | MSRPSFLIGL IGQGIGGSLS PAMHEEEGFR QGFGYVYRRI DLDVLGVTAD ALPQLLDAAQ RMGYNGLNIT HPCKQRVIEH LDALSDDARA LGAVNTVLFK DGKRIGHNTD WSGFAKSFSR GLPGASLERV VQLGAGGAGA AVAHAALQMG AAELTIFDVD GTRATALAGE LQQRFPAARV TPGSDLAAAM RAATGLIHCT PTGMVKHPGL PLPADLLHAG MWVADIVYFP LETELIHAAR AAGCATLPGG GMAVYQAVDA FELFTGRTPD AERMFSHFQS LVAR
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