| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2995 |
|---|
| Symbol | |
|---|
| ID | 4095537 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008061 |
|---|
| Strand | + |
|---|
| Start bp | 9873 |
|---|
| End bp | 10646 |
|---|
| Gene Length | 774 bp |
|---|
| Protein Length | 257 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 638016290 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_622864 |
|---|
| Protein GI | 107025353 |
|---|
| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
|---|
| TIGRFAM ID | [TIGR01096] lysine-arginine-ornithine-binding periplasmic protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTT TCCTCGTCCC GCTCGTTTTC CTGTGCATTG GCCTGGCGGC CACGTCCGCA
TATGCGCTCG ACGCGCACGT GGTGCGGCTC GGCATCGACC CGACCTATCC GCCGATGGAC
GCGAAGGCGC CCGACGGCAG CCTGAAGGGC TTCGACGTCG ATCTCGGCAA CGAGATCTGC
CGCCGCGCGC AGTTGCGCTG CCAGTGGGTC GAGCTCGAAT TCTCCGGGAT GATCCCCGCG
CTGCAGGCGC GCAAGATCGA CGCGATCCTG TCGTCGATGG CGATCACCGC GAAGCGCGAG
AAGCAGATCC TGTTCTCGTC GAAGCTGTTC CGCTTCAAGT CGCGGCTCGT CGCGCGGCCC
GGCAGCGGGC TCGACGGCAC GGCGGCGTCG CTGGCCGGCA AGCGCGTCGG CGTGCAGTCG
GGCACGCAAT TCGAATCGTG GGCGCTCGCG CACTGGGCGC CGGCCGGCGT CGGCGTGGTG
CCGTACAAGA GCCAGGACGA CGTGTTCGCC GATCTCGTGA ACGGCCGCCT CGACGCGGCG
CTGCTCGGCA CCGTGGAAGC CGACTACGGG TTCCTGCGCC AGCCGCGCGG CAAGGGTTTC
GCATTCGTCG GCGCGCCGCT CGACATGGGC GATCGCGGCG TCGGCATCGG CATGCGGCAG
TCGGATACCG CGCTGAAGGC GTCGATCGAC GGCGCGATCG CGTCGATGCT GAAGGACGGT
ACGTACGACC GGATCGCGAA GCAGTATTTC GATTTCAATC CGTACGGCGA CTGA
|
|---|
| Protein sequence | MKRFLVPLVF LCIGLAATSA YALDAHVVRL GIDPTYPPMD AKAPDGSLKG FDVDLGNEIC
RRAQLRCQWV ELEFSGMIPA LQARKIDAIL SSMAITAKRE KQILFSSKLF RFKSRLVARP
GSGLDGTAAS LAGKRVGVQS GTQFESWALA HWAPAGVGVV PYKSQDDVFA DLVNGRLDAA
LLGTVEADYG FLRQPRGKGF AFVGAPLDMG DRGVGIGMRQ SDTALKASID GAIASMLKDG
TYDRIAKQYF DFNPYGD
|
|---|
| |