Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2860 |
Symbol | |
ID | 4090975 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 3138355 |
End bp | 3139179 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638016155 |
Product | Cof protein |
Protein accession | YP_622730 |
Protein GI | 107024403 |
COG category | [R] General function prediction only |
COG ID | [COG0561] Predicted hydrolases of the HAD superfamily |
TIGRFAM ID | [TIGR00099] Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily [TIGR01484] HAD-superfamily hydrolase, subfamily IIB |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.50585 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTACAAAG TCATCGCCAC CGATCTCGAC GGTACGCTGC TGAACAGCGA CCACCAGCTC GACCCGTACA CGATCGACAC CGTTCGCCGG CTCGACCGCG ACGGCGTGCA ATTCGTGATC GCCACGGGGC GCCACTATGC GGACGTCGCC GGCATTCGCG ACGTGCTCGG CATCCGGCCG TACCTGATCA CGTCGAACGG CGCGCGCGTG CATGCGCCGG ACGACACGAA GATTCACGCG CAGGACATCG ACGCAGCGAT CGTGCGCAGC CTCGTGCAGC CGGCAGTCGT CGGCGCGCAC GGCCGCGTGA TCGTCAACCT GTTCACCAAC GACGGCTGGC TGATCGACCG CGACGCGCCG CACCTGCTCG AATTCCATCA GGATTCGGGC TTCCGGTACG ACGTGATCGA CATGGCCGCG CACGACGGCG CGGACATCGC GAAGGTGCTG TATATCGGCG AACCGGCCGA TCTGGCGGTC GTCGCCGAGC AGATGCGCGT GCAGTTCGGC GACGCGCTGT ATGTCACGTA CTCGCTGCCC GACTGCCTCG AAGTGATGAC CGCGAACGTG TCGAAGGGGC GCGCGCTGCG CGCGGTGCTC GCGCGGCTCG GCGTCGATGC CGGCCACTGC ATCGCATTCG GCGACAACAT GAACGACATC GATCTGCTCG AAACCGCCGG TCATGCGTTC ATGATGAACA ACGCGAACCC CGACCTGATC GCGCGGCTGC CGCACGTCCC GCGGATCGGC AACAACTTCG ACGCGGGCGT CGCCCGCCAT CTGCGCACGC TGTTCTCGCT GGAAGACGAC GTCGTCGCGT CCTGA
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Protein sequence | MYKVIATDLD GTLLNSDHQL DPYTIDTVRR LDRDGVQFVI ATGRHYADVA GIRDVLGIRP YLITSNGARV HAPDDTKIHA QDIDAAIVRS LVQPAVVGAH GRVIVNLFTN DGWLIDRDAP HLLEFHQDSG FRYDVIDMAA HDGADIAKVL YIGEPADLAV VAEQMRVQFG DALYVTYSLP DCLEVMTANV SKGRALRAVL ARLGVDAGHC IAFGDNMNDI DLLETAGHAF MMNNANPDLI ARLPHVPRIG NNFDAGVARH LRTLFSLEDD VVAS
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