Gene Bcen_2803 details

Gene Information

• Locus tag: Bcen_2803
• ID: 4091689
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia cenocepacia AU 1054
• Kingdom: Bacteria
• Replicon accession: NC_008060
• Strand: +
• Start bp: 3081520
• End bp: 3082218
• Gene Length: 699 bp
• Protein Length: 232 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638016098
• Product: ABC transporter related
• Protein accession: YP_622674
• Protein GI: 107024347
• COG category: [V] Defense mechanisms
• COG ID: [COG1136] ABC-type antimicrobial peptide transport system, ATPase component

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 0.0893633
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGAACGACG CCCCGACGCC CCTCGTCGAG CTCAGCCACG TCGCGAAGTC GTACCAGCGC 
GGCAACCAGA TCGTGCCCGT GCTGACCGAC ATCTCGCTCG ACATCGGCGA AGGCGACTTC 
GTCGCGCTGA TGGGGCCGTC GGGTTCCGGC AAGAGCACGC TGCTGAACCT CGTGGCCGGC 
ATCGACCGGC CCGACAGCGG CGAGCTGCGG GTCGGCGGCC TCGACATCTC GCAACTCGCC 
GAGGCGCAAC TGGCCGAATG GCGCGCGGCG AACGTCGGCT TCATCTTCCA GTTCTACAAC 
CTGATGCCCG TGCTCACCGC GTTCGAGAAC GTCGAGCTGC CGCTGATGCT CACGCCCCTG 
TCGCGCCGCG AGCGGCGCGA GCGCGTCGAG CTCGTGCTCG ACATGGTGAA TCTCGGCGAC 
CGCACGAGCC ATTACCCATC GGAGCTGTCG GGCGGCCAGC AGCAGCGCGT CGCGATCGCG 
CGTGCGCTGA TCACCGATCC GGTGCTGATC GTCGCCGACG AGCCGACCGG CGACCTCGAC 
CGCGCGTCGG CCACCGACGT GCTCGCGATG CTGCAGCGGA TGAACGCCGA GCTCGGCAAG 
ACGATCATCA TGGTGACGCA CGACGCGCAC GCGGCCGGCG CCGCGCGCTC GCTCGTCCAT 
CTGGAAAAAG GAGAGCTGAT CGATGGGCAC GCCGGCTGA 

 

Protein sequence

MNDAPTPLVE LSHVAKSYQR GNQIVPVLTD ISLDIGEGDF VALMGPSGSG KSTLLNLVAG 
IDRPDSGELR VGGLDISQLA EAQLAEWRAA NVGFIFQFYN LMPVLTAFEN VELPLMLTPL 
SRRERRERVE LVLDMVNLGD RTSHYPSELS GGQQQRVAIA RALITDPVLI VADEPTGDLD 
RASATDVLAM LQRMNAELGK TIIMVTHDAH AAGAARSLVH LEKGELIDGH AG