Gene Bcen_2707 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2707 
Symbol 
ID4091459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2979466 
End bp2980197 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content63% 
IMG OID638015993 
ProductOmpW 
Protein accessionYP_622578 
Protein GI107024251 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0259344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAA AACTGGCCAT TACGGGGGCC GCAGCGCTCG CATTCACGTT CGCGGGCGGT 
ACGGCACATG CACAATCCGC AGGTGATTTC TACGTCAGCA CCGGCTGGCT GCACCTTTCG
CCGCAGGACA GCAGTGACCC GCTGTTCGTC TACCGCGTAG GCGGCACGCC CATCAATCAA
TCGATTCCCA ACACCGGCGC CGGCATCAAC GACGCCGACA CGCTGGGGCT CGCAGCAGGC
TACTTCGTCA CCGACCATAT CTCCACCGAG CTCGTGATGG GGATCCCGCC GAAGTTCGAC
ATCACCGGCA AGGGTCAGTT CGACAGATTC GGCGTACTCG GCCGTGCATA CCAGTGGAGC
CCTGCCGTCC TGCTTCGCTA CCACTTCAAC GACGCCAATG CGAAGTTCCG TCCGTATGTC
GGCGTCGGTG CGACGTACGT CTGGTTCACC GGCGCCAAGA TCACCAACAG CGCGTTCGAG
AACGGCGTGC TCGGCGGCCC GACCAGCGCG ACGACCAGCA ACCAGTGGGC GCCCGTGCTC
AACGCCGGCT TCACGTACAA CTTCACGAAA CACTGGTTCG CAGGCCTGTC ACTGTCGTAC
ATCCCGGTCA GCGTGACCGC GACGTTCACG ACGGCCCGCC GGACGCCGGT CGGGACGCTG
ACGGAAACGT CGAAGGCCCA CATCTCGCTG AACCCGATCG TCACGTACCT GAACCTCGGC
TACCGCTTCT AA
 
Protein sequence
MKRKLAITGA AALAFTFAGG TAHAQSAGDF YVSTGWLHLS PQDSSDPLFV YRVGGTPINQ 
SIPNTGAGIN DADTLGLAAG YFVTDHISTE LVMGIPPKFD ITGKGQFDRF GVLGRAYQWS
PAVLLRYHFN DANAKFRPYV GVGATYVWFT GAKITNSAFE NGVLGGPTSA TTSNQWAPVL
NAGFTYNFTK HWFAGLSLSY IPVSVTATFT TARRTPVGTL TETSKAHISL NPIVTYLNLG
YRF