Gene Bcen_2643 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2643 
Symbol 
ID4091528 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2909619 
End bp2910401 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content63% 
IMG OID638015928 
Producthypothetical protein 
Protein accessionYP_622514 
Protein GI107024187 
COG category[S] Function unknown 
COG ID[COG3455] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03349] type IV / VI secretion system protein, DotU family 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCTACG CGCCTTCCCT GTTCGGCGAC AACGTGCCGC CGCCCCTGCA TAGCCCGGCA 
TCGACGGACT CCGCGTTCCA GGCCCGCTCG CTGCTCGATC TGCTGTACGA CGGGTTCTTC
ATGCTGTTTC TGCTCAAGAA CAAGCGGGAG CCGGACAGCG CCAGCGAGTT CAGCACGCGG
ATCCAGGAGT TCCTGTCGGA TTTCGAGCGC GGCGCGAAGA AGCTGAATAT CGCCGCCGAG
GACGTGTACG GCGCGAAGTT CGCGTTCTGC GCGGCCATCG ACGAAATGGT GCTGTCGTCG
CAGTTCAAGA TCCGCGCGGA TTGGGAACGC CGGCCGCTGC AGCTCGTGCT GTTCGGCGAG
CAGCTCGCGG GCGAGAAGTT CTTCCAGTAT CTCGAGGAGT GTCGTGCGCA GGGTGCGGCG
CGGCTGCAGT CGCTCGAGGT GTTTCATATG TGCCTGCTGC TCGGGTTCCA GGGCAAGTAT
CTGCTCGAAG GGCCGGAGAA GCTCGCGTAT CTCACCGCGC GGCTTGGGGA CGAGATCGCG
CATATGAAGG GCAAGCGGGC TGCGTTTGCG CCGCATTGGC CGCTGCCGGA TCAGATCGCG
CACCGGTTGA AGCGGGAGGT GCCGGTTTGG GCGATCGGGA CCGTGTTCGC GCTCGTTGCG
TTGCTTGGGT ATCTCGGGCT CAATACCTAT CTCAAGGACA AGACGCTGCA GGCGTTGGCG
CCGTATTCGC AAGTCATCAA AGTGGGCCCG GAGTCGGCTA ATTTGACGAT TTCGTTGCCG
TAA
 
Protein sequence
MSYAPSLFGD NVPPPLHSPA STDSAFQARS LLDLLYDGFF MLFLLKNKRE PDSASEFSTR 
IQEFLSDFER GAKKLNIAAE DVYGAKFAFC AAIDEMVLSS QFKIRADWER RPLQLVLFGE
QLAGEKFFQY LEECRAQGAA RLQSLEVFHM CLLLGFQGKY LLEGPEKLAY LTARLGDEIA
HMKGKRAAFA PHWPLPDQIA HRLKREVPVW AIGTVFALVA LLGYLGLNTY LKDKTLQALA
PYSQVIKVGP ESANLTISLP