Gene Bcen_2637 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2637 
Symbol 
ID4091522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2903912 
End bp2904415 
Gene Length504 bp 
Protein Length167 aa 
Translation table11 
GC content59% 
IMG OID638015922 
Producthypothetical protein 
Protein accessionYP_622508 
Protein GI107024181 
COG category[S] Function unknown 
COG ID[COG3157] Hemolysin-coregulated protein (uncharacterized) 
TIGRFAM ID[TIGR03344] type VI secretion system effector, Hcp1 family 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0034666 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTACATA TGCACTTGCA GTTTGGTAGT CCCGCGGTGA AGGGCGAGTC CGCGGATAAA 
GACCACCAAG GCTGGATCGA ACTGAAATCG TGGGATCACT CGATCGTTCA GCCGCGTTCG
GCAACCGCAT CGACCGCTGG CGGTCACACG ATGACGCGTT GCGAGCACGG CGACATGATC
TTCACGAAGG AAATCGATTC GTCGAGCCCG CTGCTGTATC AGCATGCTTC GGGCGGTACC
ACGTTCGACG AAGTGACGGT CCATTTCTCG CGCGCGGACG GTGAAGGCAA GCGCGTGCAG
TATCTGGAAG TCAAGCTCAA GTACGTGATC ATCTCGAGCA TCGCGCCGAG CGTTCGCGAG
GAAGGTCTGC CGCTCGAGAC GTTCTCGCTG AAGTACGCAG CCGTGCAGTG GAAGCAAACC
CAGCAGAAGA TCGGCGGCAA CCAGGGCGGC AACACGCAAG GCGCCTGGAG TCTGACGAAG
AACGACAAGA CCTACGCGGT CTAA
 
Protein sequence
MLHMHLQFGS PAVKGESADK DHQGWIELKS WDHSIVQPRS ATASTAGGHT MTRCEHGDMI 
FTKEIDSSSP LLYQHASGGT TFDEVTVHFS RADGEGKRVQ YLEVKLKYVI ISSIAPSVRE
EGLPLETFSL KYAAVQWKQT QQKIGGNQGG NTQGAWSLTK NDKTYAV