| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2549 |
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| Symbol | |
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| ID | 4093060 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia cenocepacia AU 1054 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008060 |
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| Strand | - |
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| Start bp | 2799316 |
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| End bp | 2800974 |
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| Gene Length | 1659 bp |
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| Protein Length | 552 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638015830 |
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| Product | putative inner membrane protein translocase component YidC |
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| Protein accession | YP_622421 |
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| Protein GI | 107024094 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0706] Preprotein translocase subunit YidC |
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| TIGRFAM ID | [TIGR03592] membrane protein insertase, YidC/Oxa1 family, C-terminal domain
[TIGR03593] membrane protein insertase, YidC/Oxa1 family, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.157228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATATCA AACGCACCGT CCTATGGGTG ATCTTCTTCA TGTCAGCTGT CATGCTGTAC
GACAACTGGC AGCGGGACCA TGGACGCCCG TCGATGTTCT TCCCGAGCGC CACGCACACG
GCCCCGGCCG CTGCCGGCGG CGCATCGGGC ACGAGCGCGA CGACCGCAGG TGACGTGCCT
GCCGCTGCAG CCGGCGCTGC ACCGTCGACG ACGGCCCCGG CCGCGCAGGC GCAGCTCGTG
AAGTTCTCGA CCGACGTGTA CGACGGCGAA ATCGACACGC GCGGCGGCAC GCTCGCGAAG
CTGACGCTGA AGAAGCAGGG CGACGGCAAG CAGCCCGACC TGTACATCAC GCTGTTCGAC
CACACGGCCG GCCACACGTA TCTCGCACGC ACGGGCCTGC TCGGCGGCGA TTTCCCGAAC
CACAACGACG TCTACACGCA GCTGAACCCC GGCTCGACGT CGCTGACGGG TGACGAGAAT
ACGCTGAAGC TGTCGTTCGA ATCGCCGGTG AAGGGCGGCG TGAAGGTCGT GAAGACCTAC
ACGTTCACGC GCGGCAGCTA CGTGATCGGC GTCGACACCA AGATCGACAA CGTCGGCACG
GCACCGGTCA CGCCGACGGT CTACATGGAA CTGGTGCGCG ACAACACGGC CGTCGAAACG
CCGATGTTCT CGCATACGTT CCTCGGGCCG GCGGTCTACA CGGACGCGAA GCACTTCCAG
AAGATCGACT TCAGCGACCT CGACAAGAAC AAGGCGAACT TCGAGAAGTC CTCGGACAAC
GGCTGGGTCG CGATGGTGCA GCACTACTTC GCGTCGGCCT GGATTCCGCA GCAGGGCGCG
AAGCGCGACA TCTACGCTGA AAAGATCGAC CCGACGCTGT ACCGCGTCGG CGTGAAGCAG
CCGGTCGCCG CGATCGCCCC GGGCCAGTCG GCCGACGTGC AGGCGCGCCT GTTCGCCGGT
CCGGAAGAAG AGCGCATGCT CGAAGGCATC GCGCCGGGCC TGGAGCTCGT GAAGGATTAC
GGCTGGGTGA CGATCATCGC GAAGCCGCTG TTCTGGCTGC TCGAGAAGAT CCACGGCTAT
GTCGGCAACT GGGGCTGGGC GATCGTGCTG CTGACGGTGC TGATCAAGGC CGTGTTCTTC
CCGCTGTCGG CCGCGAGCTA CAAGTCGATG GCGCGCATGA AGGAAATCAC GCCGCGCATG
CAGGCGCTGC GCGAACGCTT CAAGAGCGAT CCGCAGAAGA TGAACGCCGC GCTGATGGAG
CTGTACAAGA CCGAGAAGGT CAATCCGTTC GGCGGCTGCC TGCCGGTCGT GATCCAGATT
CCGGTGTTCA TCTCGCTGTA CTGGGTGCTG CTCGCGTCGG TCGAAATGCG CGGCGCGCCG
TGGATTCTGT GGATTCACGA CCTGTCGCAG CGCGATCCGT TCTTCATCCT GCCGGTGCTG
ATGGCCGTGT CGATGTTCGT GCAGACGAGC CTGAACCCGA CGCCGCCGGA CCCGGTCCAG
GCGAAGATGA TGAAGTTCAT GCCGATCGCG TTCTCGGTGA TGTTCTTCTT CTTCCCGGCA
GGTCTCGTGC TGTACTACGT CGTGAACAAC GTGCTGTCGA TCGCGCAGCA GTACTACATC
ACGCGCAAGC TCGGCGGCGT CAAGAAGAAG CCGGCCTGA
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| Protein sequence | MDIKRTVLWV IFFMSAVMLY DNWQRDHGRP SMFFPSATHT APAAAGGASG TSATTAGDVP
AAAAGAAPST TAPAAQAQLV KFSTDVYDGE IDTRGGTLAK LTLKKQGDGK QPDLYITLFD
HTAGHTYLAR TGLLGGDFPN HNDVYTQLNP GSTSLTGDEN TLKLSFESPV KGGVKVVKTY
TFTRGSYVIG VDTKIDNVGT APVTPTVYME LVRDNTAVET PMFSHTFLGP AVYTDAKHFQ
KIDFSDLDKN KANFEKSSDN GWVAMVQHYF ASAWIPQQGA KRDIYAEKID PTLYRVGVKQ
PVAAIAPGQS ADVQARLFAG PEEERMLEGI APGLELVKDY GWVTIIAKPL FWLLEKIHGY
VGNWGWAIVL LTVLIKAVFF PLSAASYKSM ARMKEITPRM QALRERFKSD PQKMNAALME
LYKTEKVNPF GGCLPVVIQI PVFISLYWVL LASVEMRGAP WILWIHDLSQ RDPFFILPVL
MAVSMFVQTS LNPTPPDPVQ AKMMKFMPIA FSVMFFFFPA GLVLYYVVNN VLSIAQQYYI
TRKLGGVKKK PA
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