Gene Bcen_2483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2483 
Symbol 
ID4093222 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2727019 
End bp2727810 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content70% 
IMG OID638015762 
Productpyrimidine 5-nucleotidase 
Protein accessionYP_622355 
Protein GI107024028 
COG category[R] General function prediction only 
COG ID[COG1011] Predicted hydrolase (HAD superfamily) 
TIGRFAM ID[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0380059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGCGCGC GCCGCCCGCC TGCCAGCCCC GACCTGCCGG CCCCGCTGCG GCGCCGGCGC 
ATCTCGCGCA GCCGGCCGCG CGCCGGCGCG CCCGTCTGGC TGTTCGATCT CGACAACACG
CTGCACCACG CGTCGCACGC GATCTTTCCG GAGATCAACC GTGCGATGAC GCAATACATC
ATCGACGCGC TGCAGGTCGG GCGCGCCGAA GCCGACCGCC TGCGCAACGG CTACACCGAG
CGCTACGGCG CCGCGCTGCT CGGCCTCACG CGCCATCATC CGATCGACCC GCACGATTTC
CTGCGCGTGG TCCACACGTT TTCCGACCTG CCCGCGATGG TGCGCGCCGA GCGTGGCCTC
GCGCGCATCG TCGCCGCGCT GCCGGGCCGC AAGCTGATCC TGACCAACGC GCCGGAAAAC
TATGCGCGCG CGGTGCTGCG CGAGTTGGGC ATCGAGCGGC TGTTCGAGCG CGTGATCGCG
ATCGAGCACA TGCGCGACCG CCGCATGTGG CGCGCGAAGC CCGACCACGC GATGCTGCGC
CGGACGCTGC GCGCCGCGCA TGCGCGGTTC GCCGACGCGA TCCTCGTCGA GGATACGCGC
AGCCACCTGA AGCGCTACAA GCGTCTGGGC ATCCGCACGG TATGGATCAC CGGCCACCTG
CCCGGCCATC TGCCGGCGAC CGGACGCCCG CATTATGTCG ACCAGCGCAT TCGTTCGTTA
AAATCGCTGC GACTGGGCAC ACGATCGGGG CGACAAAAAT GCAGCCGACT TACCCGCAGG
ACCAAGCCGT AA
 
Protein sequence
MSARRPPASP DLPAPLRRRR ISRSRPRAGA PVWLFDLDNT LHHASHAIFP EINRAMTQYI 
IDALQVGRAE ADRLRNGYTE RYGAALLGLT RHHPIDPHDF LRVVHTFSDL PAMVRAERGL
ARIVAALPGR KLILTNAPEN YARAVLRELG IERLFERVIA IEHMRDRRMW RAKPDHAMLR
RTLRAAHARF ADAILVEDTR SHLKRYKRLG IRTVWITGHL PGHLPATGRP HYVDQRIRSL
KSLRLGTRSG RQKCSRLTRR TKP