| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bcen_2398 |
|---|
| Symbol | |
|---|
| ID | 4092984 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia cenocepacia AU 1054 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008060 |
|---|
| Strand | + |
|---|
| Start bp | 2640930 |
|---|
| End bp | 2641814 |
|---|
| Gene Length | 885 bp |
|---|
| Protein Length | 294 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 638015677 |
|---|
| Product | DNA-binding transcriptional activator GcvA |
|---|
| Protein accession | YP_622270 |
|---|
| Protein GI | 107023943 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.273893 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGCG ATCTCCCACC CTTTTCCGCG CTTCGGGCCT TTGAAGCCGC GGCACGACAT
GAAAGCTTCA GCGCCGCCGG CGACGAGCTG CATGTGACTC ACGGTGCCAT CAGCCGGCAG
ATCGCCGGGT TCGAGGCGTG GCTCGGCAAG CCGGTGTTTC ACCGCTACGG CAAGCGCGTG
AAGCTCACCG ACGAAGGCCG CCGCTACCTG GACACCGTGC GCGCGGCCTT CGACAGCATC
GCGCTCGCCA CCGAACAGTT GCGCAACAGC GGCGCGGCGC GCGTGCTGCG CATCAACGCG
CTGCCGACCT TCGCGATGAA ATGGCTGCTG CCGCGCCTGT CGCGGTTCCA GCGCGACGTG
CCGAACGTCG AGCTGAAGCT GTCGACGTCG AATGCGCCAC TCGACACGCT GAACGGCTTC
GACGTCGCGA TCCGCCGCGG CCCCGGCCAC TGGCCGAACT GCACGAGCGG TCACTTCCTC
GACGAAAGCG TGATTCCGGT GTGCAGCCCG GCGCTGCTCA AGCGGGCGCC GATCACGCGC
GCGGACGATC TCGCGCGGCA CGTGCTACTG CATTCGGATA CGCGGCCGGA AGGCTGGCGC
GACTGGTTCG CGGCGGCCGG CGTCGCGATG AAGGGGCGCA AGCGGCAGTC GTTCGATCAC
TTCTACCTGG CGCTGCAGGC GGCCGTCGAC GGGCTCGGCG TCGCGCTCGG CCCGCTGCCG
CTGATCGACG ACGAGCTCGC GAGCGGGCGC CTGGTGATGC CGCTCGACGG GCCGCGCATC
GCGACGCGCA GCTACTGGTG GATCGCGCCG GGTGCGCCGG CCGACGATCC GCTCGTCGCG
CAGTTCTGCG CGTGGCTGCA GGGGCAGTCG AATACCGGCG CGTGA
|
|---|
| Protein sequence | MARDLPPFSA LRAFEAAARH ESFSAAGDEL HVTHGAISRQ IAGFEAWLGK PVFHRYGKRV
KLTDEGRRYL DTVRAAFDSI ALATEQLRNS GAARVLRINA LPTFAMKWLL PRLSRFQRDV
PNVELKLSTS NAPLDTLNGF DVAIRRGPGH WPNCTSGHFL DESVIPVCSP ALLKRAPITR
ADDLARHVLL HSDTRPEGWR DWFAAAGVAM KGRKRQSFDH FYLALQAAVD GLGVALGPLP
LIDDELASGR LVMPLDGPRI ATRSYWWIAP GAPADDPLVA QFCAWLQGQS NTGA
|
|---|
| |