Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2394 |
Symbol | |
ID | 4092980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 2637259 |
End bp | 2638380 |
Gene Length | 1122 bp |
Protein Length | 373 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 638015673 |
Product | porin |
Protein accession | YP_622266 |
Protein GI | 107023939 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3203] Outer membrane protein (porin) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.636281 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAGA CCACCCGACT CGCAGTCATC GCAGGGGGCG CGGCGCTGGC CTTCGCCAGC CAGTACGCAG CAGCACAAAG CTCGGTCACG CTCTGGGGCG TCGCCGACGC CAGCATTCGT TACCTGACCA ACGCCAACGC CAAGAACGAC GGCCTGCTGT CGATGACCAA CGGCGCGATC ACGAACAGCC GCTTCGGCAT CTACGGCACG GAAGATCTCG GCGGCGGCCT GAAGGCCGTG TTCAACCTCG AGAGCGGCGT GAACCTGCAG AACGGCGCGT TCGCCGACAG CGGCCGCCTG TTCAACCGCG CGGCGTACGT CGGCCTGCAG AGCCCGTACG GCACGGTGAC CCTCGGTCGC CAGAAGACGC CGCTGTTCGA CCTGCTGTCG GACACCTACG ATCCTCTGAC GGTCGGCAAC TACCTCGAAA ACGCGTGGCT GCCGGTCGCA CTCGGCGGCG GCCTGTATGC GGACAACCAG ATCAAGTACA CGGGCAAGTT CGAGGGCCTG ACGGCGAAGG CGATGTACTC GACCGGCACC AACTACGAAT CGACCGGCGC CGGCGGCTTC TCGGGCCAGA TTCCGGGTTC GCTCGGCAAG GGCAATGCGT GGGGCGTGTC GCTGTCGTAC GTGATGGGCC CGCTCAGCAT CGCGGCCGGT GCGCAGCAGA ACAGCGACAA CTCGGCGCGC AAGCAGACGA TCTACCACGC GAACGTCGTG TACGCGTTCA GCAAGGCGAA GATCTACGCG GGCTACCTGC GCTCGAAGGA CGACACGGGC TTCGTCGACA GCCTGCTCGC GCAGCAGTCG ATTCCGGTCG CGAAGGGCAC GGGCCGGATC GACGACGGTC CGTTCGCGGG CGTGAGCTGG CAGGTCAGCG CGCCGCTGAC GCTGACGGGC GCGTTCTACT ACGACCACAT GCGCAATGCG ATGACCACGA ACGGCACGCT CGCGAGCGGC AACCGCTACG CGATCGTCGG CATCGCCGAG TACGCGCTGA GCAAGCGCAC CGAAATCTAC GGCACCGTCG ACTTCAACAA GACGAACGGC GCGGCGAACG TCGAGCTGCC CGGCCGCAGC AACCAGACGG GCATCGCGAT CGGCCTGCGC AATATCTTCT GA
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Protein sequence | MKQTTRLAVI AGGAALAFAS QYAAAQSSVT LWGVADASIR YLTNANAKND GLLSMTNGAI TNSRFGIYGT EDLGGGLKAV FNLESGVNLQ NGAFADSGRL FNRAAYVGLQ SPYGTVTLGR QKTPLFDLLS DTYDPLTVGN YLENAWLPVA LGGGLYADNQ IKYTGKFEGL TAKAMYSTGT NYESTGAGGF SGQIPGSLGK GNAWGVSLSY VMGPLSIAAG AQQNSDNSAR KQTIYHANVV YAFSKAKIYA GYLRSKDDTG FVDSLLAQQS IPVAKGTGRI DDGPFAGVSW QVSAPLTLTG AFYYDHMRNA MTTNGTLASG NRYAIVGIAE YALSKRTEIY GTVDFNKTNG AANVELPGRS NQTGIAIGLR NIF
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