Gene Bcen_2345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcen_2345 
Symbol 
ID4091624 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia cenocepacia AU 1054 
KingdomBacteria 
Replicon accessionNC_008060 
Strand
Start bp2589053 
End bp2589985 
Gene Length933 bp 
Protein Length310 aa 
Translation table11 
GC content69% 
IMG OID638015626 
Producthydroxymethylglutaryl-CoA lyase 
Protein accessionYP_622219 
Protein GI107023892 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0119] Isopropylmalate/homocitrate/citramalate synthases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.511724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTTCC CCGCCACCGT CAAGATCGTC GAAGTCGGCC CGCGCGACGG GCTGCAGAAC 
GAAAAGACCT TCGTACCGAC CGACGTGAAG ATCGCGCTCG TCGACCGGCT GTCGCGCGCC
GGCTTCCGCA ACGTCGAGGC CGCGTCGTTC GTCTCGCCGA AATGGGTGCC GCAGATGGCC
GACGGCGCCG ACGTGATGGC CGGCATCGAG CGCCGCGCGG GCACCGTGTA CTCGGTGCTC
ACGCCGAACC TGAAGGGCTT CGAGAATGCG GTCGCGGCAC GGGCCGACGA AGTCGTGATC
TTCGGCGCGG CGAGCGAAGC GTTCTCGCAG CGGAACATCA ACTGCAGCAT CGCCGAGAGC
ATCGCGCGCT TCGAGCCGGT CGCGAAGGCA GCGAAAGACG CGGGCCTGCG GCTGCGCGGC
AGCGTGTCGT GCACGCTCGG CTGCCCGTAC CAAGGCGAGG TACCGGTCGC GTCGGTCGTC
GACGTCGTCG AACGGTTCGC CGCGCTCGGC TGCGACGAGA TCGACATCGC CGACACGATC
GGCGTCGGCA CGCCGAAGCG CACGCGCGAA GTGCTCGCGG CCGTCACGCG CGTGTTCCCG
CGCGAACGCC TGTCGGGCCA CTTCCACGAT ACCTACGGCC AGGCGCTCGC GAACATCTAC
GCGGCGCTGT TCGAAGGGAT CGAGATCTTC CACGCGTCGG TCGCGGGCCT CGGCGGCTGC
CCGTACGCGA AGGGCGCGAC CGGCAATGTC GCGACCGAGG ACGTGCTGTA CCTGATGCAG
GGCCTCGGCA TCGAGACCGG CATCGATCTC GCGCAGGTCG TCGCCGCAGG CGATTTCATC
TCGAACGCGA TCGGCCGCGC GAACGTGTCG CGCGCCGGGC GTGCACTGCT TGCCAAGGCG
CAGAGCGCGT CCGACGCCGC GAACTGCGTC TGA
 
Protein sequence
MTFPATVKIV EVGPRDGLQN EKTFVPTDVK IALVDRLSRA GFRNVEAASF VSPKWVPQMA 
DGADVMAGIE RRAGTVYSVL TPNLKGFENA VAARADEVVI FGAASEAFSQ RNINCSIAES
IARFEPVAKA AKDAGLRLRG SVSCTLGCPY QGEVPVASVV DVVERFAALG CDEIDIADTI
GVGTPKRTRE VLAAVTRVFP RERLSGHFHD TYGQALANIY AALFEGIEIF HASVAGLGGC
PYAKGATGNV ATEDVLYLMQ GLGIETGIDL AQVVAAGDFI SNAIGRANVS RAGRALLAKA
QSASDAANCV