Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2345 |
Symbol | |
ID | 4091624 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 2589053 |
End bp | 2589985 |
Gene Length | 933 bp |
Protein Length | 310 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638015626 |
Product | hydroxymethylglutaryl-CoA lyase |
Protein accession | YP_622219 |
Protein GI | 107023892 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.511724 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGTTCC CCGCCACCGT CAAGATCGTC GAAGTCGGCC CGCGCGACGG GCTGCAGAAC GAAAAGACCT TCGTACCGAC CGACGTGAAG ATCGCGCTCG TCGACCGGCT GTCGCGCGCC GGCTTCCGCA ACGTCGAGGC CGCGTCGTTC GTCTCGCCGA AATGGGTGCC GCAGATGGCC GACGGCGCCG ACGTGATGGC CGGCATCGAG CGCCGCGCGG GCACCGTGTA CTCGGTGCTC ACGCCGAACC TGAAGGGCTT CGAGAATGCG GTCGCGGCAC GGGCCGACGA AGTCGTGATC TTCGGCGCGG CGAGCGAAGC GTTCTCGCAG CGGAACATCA ACTGCAGCAT CGCCGAGAGC ATCGCGCGCT TCGAGCCGGT CGCGAAGGCA GCGAAAGACG CGGGCCTGCG GCTGCGCGGC AGCGTGTCGT GCACGCTCGG CTGCCCGTAC CAAGGCGAGG TACCGGTCGC GTCGGTCGTC GACGTCGTCG AACGGTTCGC CGCGCTCGGC TGCGACGAGA TCGACATCGC CGACACGATC GGCGTCGGCA CGCCGAAGCG CACGCGCGAA GTGCTCGCGG CCGTCACGCG CGTGTTCCCG CGCGAACGCC TGTCGGGCCA CTTCCACGAT ACCTACGGCC AGGCGCTCGC GAACATCTAC GCGGCGCTGT TCGAAGGGAT CGAGATCTTC CACGCGTCGG TCGCGGGCCT CGGCGGCTGC CCGTACGCGA AGGGCGCGAC CGGCAATGTC GCGACCGAGG ACGTGCTGTA CCTGATGCAG GGCCTCGGCA TCGAGACCGG CATCGATCTC GCGCAGGTCG TCGCCGCAGG CGATTTCATC TCGAACGCGA TCGGCCGCGC GAACGTGTCG CGCGCCGGGC GTGCACTGCT TGCCAAGGCG CAGAGCGCGT CCGACGCCGC GAACTGCGTC TGA
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Protein sequence | MTFPATVKIV EVGPRDGLQN EKTFVPTDVK IALVDRLSRA GFRNVEAASF VSPKWVPQMA DGADVMAGIE RRAGTVYSVL TPNLKGFENA VAARADEVVI FGAASEAFSQ RNINCSIAES IARFEPVAKA AKDAGLRLRG SVSCTLGCPY QGEVPVASVV DVVERFAALG CDEIDIADTI GVGTPKRTRE VLAAVTRVFP RERLSGHFHD TYGQALANIY AALFEGIEIF HASVAGLGGC PYAKGATGNV ATEDVLYLMQ GLGIETGIDL AQVVAAGDFI SNAIGRANVS RAGRALLAKA QSASDAANCV
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