Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2260 |
Symbol | actP |
ID | 4093002 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | - |
Start bp | 2492063 |
End bp | 2493748 |
Gene Length | 1686 bp |
Protein Length | 561 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638015541 |
Product | acetate permease |
Protein accession | YP_622134 |
Protein GI | 107023807 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.081454 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGCA TTTCGCGCGC GCTCGGCGCG CTGACCGTTC TCGTTTCCTC CACCGCCCAT GCCACCGGCA TCGCCGGCCC GATGCCCGAC AAGGTCGAGC TGAACCCGGT CGCGATCGGG ATGTTCTTCG CGTTCGTGTT CGCGACGCTC GCGCTCACAC GCTGGGCCGC GCGCCGCACG CGCTCGACGC GCGACTTCTA CACGGCCGGC GGCGGCATCA CCGGGCTGCA GAACGGGCTC GCGATCGCGG GCGACTACAT GTCGGCCGCA TCGTTCCTCG GGCTGTCCGG GATGGTGTTC ATGTTCGGCT TCGACGGGCT GATCTACTCG ATCGGCTTCC TGGTCGGCTG GCCGTTCGTG ATGTTCCTGA TCGCCGAACC GCTGCGCAAC CTCGGCAAGT TCACGTTCGT CGACGTCGTC GCGTACCGCT TCGCGCAGCG GCCGATCCGG CTGCTGACCT CGGCGAACGC GCTGACCATC GTCGTGCTGT ACCTCGTCGT GCAGATGGTC GGCGCCGGCA AGCTGATCCA GTTGCTGTTC GGACTGTCGT ACGGCACGGC CGAGCTGATC GTCGGCGTGC TGATGGTCGT CTACGTGTTC TTCGGCGGGA TGACCGCGAC CACGTGGGTG CAGGTGATCA AGGCCGTGCT GCTGCTGTGC GGCGCGACGC TGCTCGCGTG GCTCGCGCTC GGCGAATTCG GCTTCAGCGT CGACACGATG TTCCGCCGCG CGGTGGCCGT GCATCCGGGC GCGCTGTCGA TCATGGGGCC CGGCAAGCTG ATCCGCGACC CGGCCAACGC GCTGTCGCTC GGCATCGCGC TGATGTTCGG CACGGCCGGC TTCCCGCACA TCCTGATGCG CTTCTTCACG GTGCCGAACG CGAAGGAGGC GCGCAAGTCG GTGCTCTACG CGACGGGCTT CATCGGCTAC TTCTACCTGC TGACCTTCGT GATCGGCTTT TCGGCGATCG TGCTGCTCGC GCAGCATCCG GAATTCTTCC GGCTCGGCGC GAACGGCACG TTCAACCTGA CGCACGACCT GCTCGGCGGC TCCAACATGG TCGCGGTGAA GCTCGCGCAG GCAGTGGGCG GCAACTGGTT CTACGGGTTC ATCGCGGCCG TCACGTTCGC AACGATCCTC GCGGTGGTCG CCGGGCTTAC GCTCGCCGGC GCGACGACGA TTTCGCACGA CCTGTATGCG CAGATGTGGG CGCGCGGCAA GCCCGACGAA CGGCTCGAGA TGCGCATCTC GCGCGCGGCG ACGATCGGGC TGTCGGCCGT CGCGATCGCG CTGTCGATCC TGTTCGAGCA CGTGAACGTC GCGTTCATGG TCGGGCTCGT CGCGGCGGTG GCGGCGAGCG CCAATTTCCC GGTGCTCGCG ATGTCGATCT TCTGGCGCGG GATGACCACG CGCGGCGCGG TGCTCGGCGG CGGTCTCGGC CTCGTGTCGG CGGTTGCGCT CACGGTGTTG TCGAAGTCGG TGTGGGTCGA CGTGCTGCAT CACGCCCACG CGGCGGTATT CCTCGACAAC CCGGCGCTCG TGTCGGTGCC GCTCGCGTTC GTCGGGATCG TGGTCGGCTC GCTCGCGGAT CGCGGCGAGC GCGCACGCCG CGAGCGCGAC GCGTTCGCGC AGCAGGAGTT CTACGCGCAG ACCGGCCTGC TGGCCGGCGA GGCCGTGCAG CACTGA
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Protein sequence | MRRISRALGA LTVLVSSTAH ATGIAGPMPD KVELNPVAIG MFFAFVFATL ALTRWAARRT RSTRDFYTAG GGITGLQNGL AIAGDYMSAA SFLGLSGMVF MFGFDGLIYS IGFLVGWPFV MFLIAEPLRN LGKFTFVDVV AYRFAQRPIR LLTSANALTI VVLYLVVQMV GAGKLIQLLF GLSYGTAELI VGVLMVVYVF FGGMTATTWV QVIKAVLLLC GATLLAWLAL GEFGFSVDTM FRRAVAVHPG ALSIMGPGKL IRDPANALSL GIALMFGTAG FPHILMRFFT VPNAKEARKS VLYATGFIGY FYLLTFVIGF SAIVLLAQHP EFFRLGANGT FNLTHDLLGG SNMVAVKLAQ AVGGNWFYGF IAAVTFATIL AVVAGLTLAG ATTISHDLYA QMWARGKPDE RLEMRISRAA TIGLSAVAIA LSILFEHVNV AFMVGLVAAV AASANFPVLA MSIFWRGMTT RGAVLGGGLG LVSAVALTVL SKSVWVDVLH HAHAAVFLDN PALVSVPLAF VGIVVGSLAD RGERARRERD AFAQQEFYAQ TGLLAGEAVQ H
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