Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2185 |
Symbol | |
ID | 4092117 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 2411023 |
End bp | 2412846 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638015465 |
Product | tetratricopeptide TPR_2 |
Protein accession | YP_622059 |
Protein GI | 107023732 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2956] Predicted N-acetylglucosaminyl transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTGC CCTCGAAGCT GCTTCAGGAG CGCCCCGCCG CCGTGCGCGG CGCGCGCGCC TTCCCGGTCC GCCGTGCACT CGGTGCCGCG CTGTTTGCCG TCTGGACCCT CACCGCCTTT CCGGCCCACG CGCAGGATCC GGCATCGGAC GACGCGGAGC CGCAGGGTGC GTTCGAGCAT GTGATGCCGG ACGAGCAGAA AAATCTCCCC GGCGTGCCTC TGACGAGCCA GATCGTCTAC CAGGTGCTCG CCGCCGAGGT CGCGCTCCAG CGCAATCAGC CGGCGCCGGC CTACCAGACC TACCTCGCGC TGGCCCGCGA CACGCGCGAT CCGCGCATGG CGCAGCGCGC GACCGAAATC GCGCTCGGCG CGCAGAGCCC GGCCGACGCG CTGTCCGCCG CGAACCTGTG GCGTCAGTAC GCACCGGATT CGAACCGGGC GTCGCAGGTC GACGCCGCGC TGCTGGTGCT CGCCGGCAAG CCGGCCGACG CGCAGCCGAT GCTCGCGCGC GAGCTGGCCC GCGCGAGCGG CGACACGCGC GGCCCGGCGA TCCTCGCGCT GCAGGCGCTG CTCGTGCGCG GCCCCGACCG CGTCGGCGGC CTCGCGGTGC TGAAGGATAT GCTGAAGAAC GACATGAATC GCCCCGAGGC GCAGCTCGCG ATCGCGCGGC AGCAGCTCGC GGTCGACGAC AAGGACGGCG CCGCGCAGTC GCTGAAGCAG GCGCTGCAGC TCCGCCCCGA CTACCTGCCG GCAGCGCTGA TGCTGTCGCA GATGGGGCCG GCGGAACGTG CGGCGGGCAT CGCGTCGTTC GAGAAGTATG TTCAGCAGAA TCCGAAGTCG CGCGACGCGC GGCTCGCGCT GTCGCAGCTC TATCTCGCCG ACGATCGCCT CGACGACGCG CAGAAGCAGT TCGAGACGAT GCGCAAGCTC GACGCGAAGG ACCCGACGCC GCTGATGGCG CTCGCGCTGA TCAAGATCCA GCAGAAGAAA CTCGACGAGG CGACCGGCTA CCTGAAGCAG TACGTGCAGC TCGGCGACAA GCAGCCGAAC CTCGACGTCG GCCAGGGCTA CATCTATCTC GCGCAGATCG CGATCGACCA GAACAACGAC GCGCAGGCGT CGCAATGGCT CGACAAGGTC GACCAGACGA GCCAGCACTA CCTGCCCGCG CAGATCACGC GTGCGCAGCT CCTGCAGAAA CAGGGCAAGA CCGACGAGGC GCGCAAGGTG CTCGACAACC TGCCGATCTC GGATCCGCGC GATGCGGCCG TGGTGGCGCG CACCGATGCG TCGATCCTGT TCACGGCGAA GCGCTATCCG GAAGCGGAGG CGCGGCTCGG GCAGGCCGTC CAGGACTTCC CGGACGACCC CGACCTGCGC TACGACTACG CGATGGCGGC CGAAAAGACC GGCCACTACG CGACGATGGA AAAGCAACTG CGCGAGCTGA TCCGTACGCA GCCCGACAAC CCGCAGGCCT ACAACGCGCT CGGCTATTCG CTCGCCGATC GCAACCAGCG CCTGCCCGAG GCCAGCAAGC TGATCGACAA GGCGATGGCG CTCGCGCCGA ACGACGCGTA CATCATGGAC AGCCTCGGCT GGGTGAAGTA CCGGATGGGC GACACGGCCG GGGCGACGAA GGTGCTGCAG CGTGCATACG AACTGCAGCC GAACGCCGAA ATCGGCGCGC ATCTCGGCGA AGTGCTGTGG AAGAGCGGCG CGCAGGACGA CGCGCGCAAC GCGTGGCGTG CCGCGCAGAA GCTCGAGCCC GACAACGAAA CGCTCGTGCA GACGCTGAAA CGCCTGCAGA TCAACGGCCT CTGA
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Protein sequence | MTLPSKLLQE RPAAVRGARA FPVRRALGAA LFAVWTLTAF PAHAQDPASD DAEPQGAFEH VMPDEQKNLP GVPLTSQIVY QVLAAEVALQ RNQPAPAYQT YLALARDTRD PRMAQRATEI ALGAQSPADA LSAANLWRQY APDSNRASQV DAALLVLAGK PADAQPMLAR ELARASGDTR GPAILALQAL LVRGPDRVGG LAVLKDMLKN DMNRPEAQLA IARQQLAVDD KDGAAQSLKQ ALQLRPDYLP AALMLSQMGP AERAAGIASF EKYVQQNPKS RDARLALSQL YLADDRLDDA QKQFETMRKL DAKDPTPLMA LALIKIQQKK LDEATGYLKQ YVQLGDKQPN LDVGQGYIYL AQIAIDQNND AQASQWLDKV DQTSQHYLPA QITRAQLLQK QGKTDEARKV LDNLPISDPR DAAVVARTDA SILFTAKRYP EAEARLGQAV QDFPDDPDLR YDYAMAAEKT GHYATMEKQL RELIRTQPDN PQAYNALGYS LADRNQRLPE ASKLIDKAMA LAPNDAYIMD SLGWVKYRMG DTAGATKVLQ RAYELQPNAE IGAHLGEVLW KSGAQDDARN AWRAAQKLEP DNETLVQTLK RLQINGL
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