Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcen_2177 |
Symbol | |
ID | 4092109 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia cenocepacia AU 1054 |
Kingdom | Bacteria |
Replicon accession | NC_008060 |
Strand | + |
Start bp | 2403239 |
End bp | 2404735 |
Gene Length | 1497 bp |
Protein Length | 498 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638015457 |
Product | RNA polymerase factor sigma-54 |
Protein accession | YP_622051 |
Protein GI | 107023724 |
COG category | [K] Transcription |
COG ID | [COG1508] DNA-directed RNA polymerase specialized sigma subunit, sigma54 homolog |
TIGRFAM ID | [TIGR02395] RNA polymerase sigma-54 factor |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCCA GCCTTCAACT CCGCCTGTCG CAACATCTTG CGCTGACGCC TCAGCTGCAG CAGTCGATCC GGCTCCTGCA GTTGTCGACG CTCGAATTGC AGCAGGAAGT CGCGATGGCC GTCGCGCAGA ACCCGCTGCT CGAGAACGAC GACGAATGGA TCGCCAGCCC GCTGCGCGTC GCGGCGGACG GATCGCTGAT CGCGCAGACG CCGCCCGCAC AGAACACCGA GCCCACCGCG ACCAACGGCA GCAGCACGTC CAGCGAGCGC GACGAGCCGG CCGGCGCCGA CGAATACGAC GGCTACGGGT CCGGTGACGG CAACGACGGC CCGCAGTGGA ATCTCGACGA ATACGGCCGC TCGAGCGGCG CGTCCGACGA CGACGACCTG CCGCCGCTGC AGGTGCAGGA AGCCGCGACG TCGCTGCGCG ATCATCTCTC GGCGCAGTTG CGCGTCACCC AGGCCGGCCC GCGCGATCGC GCGCTCGTGA TGTTCCTGAT CGAATCGCTC GACGACGATG GCTACCTGAC CGCCACGCTC GACGAAGTAC TCGCCGACCT GCCGCCCGAA CTGGAAATCG ACGGCGACGA ACTGAATGCG GCGCTCGCGC TGCTGCACAG CTTCGACCCG GCCGGCGTCG GCGCGCGCTC GGCCTCCGAA TGCCTGAAGC TGCAGCTGCT GCGGCTCGAT CCGTCCCCCA CGCGCACGCT CGCGCTCGAG ATCGTGTCGC AGCATCTCGA ACTGCTCGCC GCACGCGACT TCACACGGTT GCGCAAGCAC CTGAAGGCGA GCGACGACGC GCTGCGCGAC GCGCACGCGC TGATCCGCTC GCTGGAGCCG TTCCCCGGCG CCGCCTACGG CAAGGCCGAG GCCGACTACG TCGTGCCCGA CATCATCGTG AAGAAGGCCG GCCAGGGATG GCTCGCGGAG CTCAATCCGG AGGTCGTGCC GCGCCTGCGG ATCAACAACC TGTACGCGAA CATCCTGCGC AACAGCCGCG GCGATCCGTC GGCCGGATCG TTGAAGCAGC AGCTGCAGGA AGCTCGCTGG TTGATCAAGA ACATCCAGCA GCGTTTCGAC ACGATCCTGC GTGTCGCGCA GGCTATTGTC GAGCGTCAGA AGAATTTCTT TGCGCACGGT GAAATTGCCA TGCGCCCCTT GGTTTTGCGG GAAATAGCTG ATACGCTGGG CCTACACGAG TCGACTGTCA GCCGTGTGAC AACCGGGAAG TACATGCTGA CCCCGTTCGG GACGCTTGAA TTTAAGTACT TCTTCGGATC TCACGTCTCG ACCGACACCG GTGGCGCCGC CTCGTCGACC GCCATCCGAG CCCTCATCAA GCAACTGATA GGAGCTGAAG ACCCAAAATC GCCACTTTCG GACAGCCGCA TTGCCGAGCT GCTGGCAGAA CAGGGTTTCG TGGTCGCGCG CCGCACGGTT GCGAAATATC GCGAAGCCCT CAAGATCCCG GCAGTGAATC TGCGCAAGTC TCTTTAA
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Protein sequence | MKASLQLRLS QHLALTPQLQ QSIRLLQLST LELQQEVAMA VAQNPLLEND DEWIASPLRV AADGSLIAQT PPAQNTEPTA TNGSSTSSER DEPAGADEYD GYGSGDGNDG PQWNLDEYGR SSGASDDDDL PPLQVQEAAT SLRDHLSAQL RVTQAGPRDR ALVMFLIESL DDDGYLTATL DEVLADLPPE LEIDGDELNA ALALLHSFDP AGVGARSASE CLKLQLLRLD PSPTRTLALE IVSQHLELLA ARDFTRLRKH LKASDDALRD AHALIRSLEP FPGAAYGKAE ADYVVPDIIV KKAGQGWLAE LNPEVVPRLR INNLYANILR NSRGDPSAGS LKQQLQEARW LIKNIQQRFD TILRVAQAIV ERQKNFFAHG EIAMRPLVLR EIADTLGLHE STVSRVTTGK YMLTPFGTLE FKYFFGSHVS TDTGGAASST AIRALIKQLI GAEDPKSPLS DSRIAELLAE QGFVVARRTV AKYREALKIP AVNLRKSL
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